SCOPe 2.07: Domain d3qpzd_: 3qpz D:

Lineage for d3qpzd_ (3qpz D:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein automated matches [190083] (10 species)
   not a true protein

7. Species Neisseria meningitidis [TaxId:122586] [189819] (16 PDB entries)

8. Domain d3qpzd_: 3qpz D: [184564]
   automated match to d1d9ea_
   complexed with cl, gol, na, po4; mutant

Details for d3qpzd_

PDB Entry: 3qpz, 1.75 Å

PDB Description: Crystal structure of the N59A mutant of the 3-deoxy-d-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis

PDB Compounds: (D:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d3qpzd_:

Sequence, based on SEQRES records:

>d3qpzd_ c.1.10.4 (D:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkaar
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqtrdagsaasggrraqaldlalagmatrlaglfleshpd
pklakcdgpsalplhlledflirikalddliksqpil

Sequence, based on observed residues (ATOM records):

>d3qpzd_ c.1.10.4 (D:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkaar
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqtaqaldlalagmatrlaglfleshsalplhlledflir
ikalddliksqpil

Timeline for d3qpzd_:

• d3qpzd_ first appeared in SCOPe 2.01
  
• d3qpzd_ appears in SCOPe 2.06
  
• d3qpzd_ appears in the current release, SCOPe 2.08