SCOPe 2.08: Domain d3o52b_: 3o52 B:

Lineage for d3o52b_ (3o52 B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.113: Nudix [55810] (1 superfamily)
   beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
   contains beta-grasp motif

4. Superfamily d.113.1: Nudix [55811] (8 families)

5. Family d.113.1.1: MutT-like [55812] (17 proteins)

6. Protein ADP-ribose pyrophosphatase homologue YffH [103201] (1 species)

7. Species Escherichia coli [TaxId:562] [103202] (5 PDB entries)

8. Domain d3o52b_: 3o52 B: [182802]
   automated match to d1viua_
   complexed with cl, na, tar
   has additional subdomain(s) that are not in the common domain

Details for d3o52b_

PDB Entry: 3o52, 2.5 Å

PDB Description: Structure of the E.coli GDP-mannose hydrolase (yffh) in complex with tartrate

PDB Compounds: (B:) GDP-mannose pyrophosphatase nudK

SCOPe Domain Sequences for d3o52b_:

Sequence, based on SEQRES records:

>d3o52b_ d.113.1.1 (B:) ADP-ribose pyrophosphatase homologue YffH {Escherichia coli [TaxId: 562]}
qqitlikdkilsdnyftlhnitydltrkdgevirhkrevydrgngatillyntkkktvvl
irqfrvatwvngnesgqliescaglldndepevcirkeaieetgyevgevrklfelymsp
ggvtelihffiaeysdnqranagggvededievlelpfsqalemiktgeirdgktvllln
ylqtshlmd

Sequence, based on observed residues (ATOM records):

>d3o52b_ d.113.1.1 (B:) ADP-ribose pyrophosphatase homologue YffH {Escherichia coli [TaxId: 562]}
qqitlikdkilsdnyftlhnitydltrkdgevirkrevydrgngatillyntkkktvvli
rqfrvatwvngnesgqliescaglldndepevcirkeaieetgyevgevrklfelymspg
gvtelihffiaeysdndievlelpfsqalemiktgeirdgktvlllnylqtshlmd

Timeline for d3o52b_:

• d3o52b_ first appeared in SCOPe 2.01
  
• d3o52b_ appears in SCOPe 2.07