SCOPe 2.08: Family d.113.1.1: MutT-like

Lineage for Family d.113.1.1: MutT-like

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.113: Nudix [55810] (1 superfamily)
   beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
   contains beta-grasp motif

4. Superfamily d.113.1: Nudix [55811] (8 families)

5. Family d.113.1.1: MutT-like [55812] (17 proteins)

Proteins:

1. 7,8-dihydro-8-oxoguanine triphosphatase Hmth1 [103207] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [103208] (79 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [346571] (3 PDB entries)

2. ADP compounds hydrolase NudE [103203] (1 species)

   • Species Escherichia coli [TaxId:562] [103204] (2 PDB entries)

3. ADP-ribose pyrophosphatase [64365] (4 species)

   1. Species Escherichia coli [TaxId:562] [64366] (5 PDB entries)

   2. Species Mycobacterium tuberculosis [TaxId:1773] [103200] (5 PDB entries)
      gene Rv1700

   3. Species Thermus thermophilus [TaxId:274] [118083] (13 PDB entries)
      Uniprot Q84CU3

   4. Species Thermus thermophilus [TaxId:300852] [316338] (9 PDB entries)

4. ADP-ribose pyrophosphatase homologue YffH [103201] (1 species)

   • Species Escherichia coli [TaxId:562] [103202] (5 PDB entries)

5. AP6A hydrolase Ndx1 [143758] (1 species)

   • Species Thermus thermophilus [TaxId:274] [143759] (3 PDB entries)
     Uniprot Q75UV1 1-126

6. Coenzyme A pyrophosphatase [90022] (1 species)

   • Species Deinococcus radiodurans [TaxId:1299] [90023] (2 PDB entries)

7. Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) [64367] (3 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [118084] (3 PDB entries)
      Uniprot P50583

   2. Species Narrow-leaved blue lupine (Lupinus angustifolius) [TaxId:3871] [64368] (2 PDB entries)

   3. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [75526] (2 PDB entries)

8. Diphosphoinositol polyphosphate phosphohydrolase [143766] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [143767] (16 PDB entries)
     Uniprot O95989 8-142

9. Hypothetical protein DR1025 [103209] (1 species)

   • Species Deinococcus radiodurans [TaxId:1299] [103210] (4 PDB entries)

10. Hypothetical protein EF1141 [143756] (1 species)

    • Species Enterococcus faecalis [TaxId:1351] [143757] (1 PDB entry)
      Uniprot Q836H1 2-148

11. Hypothetical protein NE0184 [143760] (1 species)

    • Species Nitrosomonas europaea [TaxId:915] [143761] (1 PDB entry)
      Uniprot Q82XR9 4-149

12. Hypothetical protein PAE3301 [75527] (1 species)

    • Species Pyrobaculum aerophilum [TaxId:13773] [75528] (3 PDB entries)

13. Hypothetical protein SP1235 (spr1115) [143762] (1 species)

    • Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [143763] (1 PDB entry)
      Uniprot Q97QH6 1-155

14. Nucleoside triphosphate pyrophosphorylase (MutT) [55813] (3 species)

    1. Species Escherichia coli K-12 [TaxId:83333] [189082] (3 PDB entries)

    2. Species Escherichia coli [TaxId:562] [55814] (8 PDB entries)

    3. Species Escherichia coli [TaxId:83333] [389729] (1 PDB entry)

15. NUDT9 (mitochondrial ADP-ribose pyrophosphatase) [103205] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [103206] (2 PDB entries)

16. U8 snorna-binding protein x29 [143764] (1 species)
    nuclear decapping enzyme

    • Species African clawed frog (Xenopus laevis) [TaxId:8355] [143765] (1 PDB entry)
      Uniprot Q6TEC1 14-209

17. automated matches [190465] (6 species)
    not a true protein

    1. Species African clawed frog (Xenopus laevis) [TaxId:8355] [187382] (6 PDB entries)

    2. Species Canis lupus [TaxId:9615] [347014] (1 PDB entry)

    3. Species Human (Homo sapiens) [TaxId:9606] [189707] (13 PDB entries)

    4. Species Mouse (Mus musculus) [TaxId:10090] [187640] (1 PDB entry)

    5. Species Mycobacterium tuberculosis [TaxId:1773] [323913] (1 PDB entry)

    6. Species Zebrafish (Danio rerio) [TaxId:7955] [315259] (2 PDB entries)

More info for Family d.113.1.1: MutT-like

Timeline for Family d.113.1.1: MutT-like:

• Family d.113.1.1: MutT-like first appeared (with stable ids) in SCOP 1.55, called Family d.113.1.1: Nucleoside triphosphate pyrophosphorylase (MutT)
  
• Family d.113.1.1: MutT-like appears in SCOPe 2.07