SCOPe 2.04: Domain d3gj1b_: 3gj1 B:

Lineage for d3gj1b_ (3gj1 B:)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.22: GFP-like [54510] (1 superfamily)
   beta-sheet folds into a barrel (n=11, S=14) around the central helix

4. Superfamily d.22.1: GFP-like [54511] (3 families)

5. Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)

6. Protein Green fluorescent protein, GFP [54513] (4 species)

7. Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (160 PDB entries)
   Uniprot P42212

8. Domain d3gj1b_: 3gj1 B: [176678]
   automated match to d1q4aa_
   complexed with cl, so4

Details for d3gj1b_

PDB Entry: 3gj1, 1.8 Å

PDB Description: non photoactivated state of pa-gfp

PDB Compounds: (B:) Green fluorescent protein

SCOPe Domain Sequences for d3gj1b_:

Sequence; same for both SEQRES and ATOM records:

>d3gj1b_ d.22.1.1 (B:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagit

Timeline for d3gj1b_:

• d3gj1b_ first appeared in SCOPe 2.01
  
• d3gj1b_ appears in SCOPe 2.03
  
• d3gj1b_ appears in SCOPe 2.05
  
• d3gj1b_ appears in the current release, SCOPe 2.08