PDB entry 3gj1

View 3gj1 on RCSB PDB site
Description: Non photoactivated state of PA-GFP
Class: luminescent protein
Keywords: beta barrel, Chromophore, Luminescence, Photoprotein, LUMINESCENT PROTEIN
Deposited on 2009-03-07, released 2009-03-24
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-04-07, with a file datestamp of 2009-04-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.211
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (Start-230)
      • engineered (80)
      • engineered (99)
      • engineered (153)
      • engineered (163)
      • engineered (203)
    Domains in SCOPe 2.04: d3gj1a_
  • Chain 'B':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (Start-230)
      • engineered (80)
      • engineered (99)
      • engineered (153)
      • engineered (163)
      • engineered (203)
    Domains in SCOPe 2.04: d3gj1b_
  • Chain 'C':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (Start-230)
      • engineered (80)
      • engineered (99)
      • engineered (153)
      • engineered (163)
      • engineered (203)
    Domains in SCOPe 2.04: d3gj1c_
  • Chain 'D':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212
      • engineered (80)
      • engineered (99)
      • engineered (153)
      • engineered (163)
      • engineered (203)
    Domains in SCOPe 2.04: d3gj1d_
  • Heterogens: SO4, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gj1A (A:)
smskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagit

    Sequence, based on observed residues (ATOM records): (download) 
    >3gj1A (A:)
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagit

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gj1B (B:)
smskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagit

    Sequence, based on observed residues (ATOM records): (download) 
    >3gj1B (B:)
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagit

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gj1C (C:)
smskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagit

    Sequence, based on observed residues (ATOM records): (download) 
    >3gj1C (C:)
kgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvt
tfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtlvnr
ielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladhy
qqntpigvllpdnhylshqsalskdpnekrdhmvllefvtaagit

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3gj1D (D:)
smskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagit

    Sequence, based on observed residues (ATOM records): (download) 
    >3gj1D (D:)
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttfgygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhylshqsalskdpnekrdhmvllefvtaagi