SCOPe 2.08: Domain d2znqb1: 2znq B:206-475

Lineage for d2znqb1 (2znq B:206-475)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Peroxisome proliferator-activated receptor delta, PPAR-DELTA [48526] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [48527] (37 PDB entries)

8. Domain d2znqb1: 2znq B:206-475 [171381]
   Other proteins in same PDB: d2znqb2
   automated match to d1gwxa_
   protein/DNA complex; complexed with 401, b7g

Details for d2znqb1

PDB Entry: 2znq, 2.65 Å

PDB Description: human ppar delta ligand binding domain in complex with a synthetic agonist tipp401

PDB Compounds: (B:) Peroxisome proliferator-activated receptor delta

SCOPe Domain Sequences for d2znqb1:

Sequence, based on SEQRES records:

>d2znqb1 a.123.1.1 (B:206-475) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
pqvadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwk
qlvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvhea
ifamlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdla
lfiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrql
vtehaqmmqrikktetetslhpllqeiykd

Sequence, based on observed residues (ATOM records):

>d2znqb1 a.123.1.1 (B:206-475) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
pqvadlkafskhiynaylknfnmtkkkarsiltgapfvihdietlwqaekglvwlppyke
isvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasivnk
dgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilcgd
rpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmqri
kktetetslhpllqeiykd

Timeline for d2znqb1:

• d2znqb1 first appeared in SCOPe 2.01, called d2znqb_
  
• d2znqb1 appears in SCOPe 2.07