SCOPe 2.05: Domain d1bgda_: 1bgd A:

Lineage for d1bgda_ (1bgd A:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.26: 4-helical cytokines [47265] (1 superfamily)
   core: 4 helices; bundle, closed; left-handed twist; 2 crossover connections

4. Superfamily a.26.1: 4-helical cytokines [47266] (4 families)
   there are two different topoisomers of this fold with different entanglements of the two crossover connections

5. Family a.26.1.1: Long-chain cytokines [47267] (10 proteins)

6. Protein Granulocyte-colony stimulating factor (G-CSF) [47268] (3 species)

7. Species Dog (Canis familiaris) [TaxId:9615] [47271] (2 PDB entries)

8. Domain d1bgda_: 1bgd A: [16825]

Details for d1bgda_

PDB Entry: 1bgd, 2.3 Å

PDB Description: crystal structure of canine and bovine granulocyte-colony stimulating factor (g-csf)

PDB Compounds: (A:) granulocyte colony-stimulating factor

SCOPe Domain Sequences for d1bgda_:

Sequence, based on SEQRES records:

>d1bgda_ a.26.1.1 (A:) Granulocyte-colony stimulating factor (G-CSF) {Dog (Canis familiaris) [TaxId: 9615]}
lpqsfllkcleqmrkvqadgtalqetlcathqlchpeelvllghalgipqpplsscssqa
lqlmgclrqlhsglflyqgllqalagispelaptldtlqldttdfainiwqqmedlgmap
avpptqgtmpaftsafqrraggvlvasnlqsflelayralrhfa

Sequence, based on observed residues (ATOM records):

>d1bgda_ a.26.1.1 (A:) Granulocyte-colony stimulating factor (G-CSF) {Dog (Canis familiaris) [TaxId: 9615]}
lpqsfllkcleqmrkvqadgtalqetlcathqlchpeelvllghalgipqpplsscssqa
lqlmgclrqlhsglflyqgllqalagispelaptldtlqldttdfainiwqqmedlgmap
tmpaftsafqrraggvlvasnlqsflelayralrhfa

Timeline for d1bgda_:

• d1bgda_ first appeared (with stable ids) in SCOP 1.55, called d1bgd__
  
• d1bgda_ appears in SCOPe 2.04
  
• d1bgda_ appears in SCOPe 2.06
  
• d1bgda_ appears in the current release, SCOPe 2.08