Lineage for d2pmpa_ (2pmp A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2958618Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 2960358Superfamily d.79.5: IpsF-like [69765] (2 families) (S)
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. 2960359Family d.79.5.1: IpsF-like [69766] (3 proteins)
    automatically mapped to Pfam PF02542
  6. 2960360Protein 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767] (6 species)
  7. 2960426Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [187992] (1 PDB entry)
  8. 2960427Domain d2pmpa_: 2pmp A: [167219]
    automated match to d1vh8a_
    complexed with c5p, cl, po4, zn

Details for d2pmpa_

PDB Entry: 2pmp (more details), 2.3 Å

PDB Description: structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from the isoprenoid biosynthetic pathway of arabidopsis thaliana
PDB Compounds: (A:) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

SCOPe Domain Sequences for d2pmpa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2pmpa_ d.79.5.1 (A:) 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
tlpfrighgfdlhrlepgypliiggiviphdrgceahsdgdvllhcvvdailgalglpdi
gqifpdsdpkwkgaassvfikeavrlmdeagyeignldatlilqrpkisphketirsnls
kllgadpsvvnlkakthekvdslgenrsiaahtvillmkk

SCOPe Domain Coordinates for d2pmpa_:

Click to download the PDB-style file with coordinates for d2pmpa_.
(The format of our PDB-style files is described here.)

Timeline for d2pmpa_: