SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Fold d.79: Bacillus chorismate mutase-like

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2180205Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

Superfamilies:

  1. 2180206d.79.1: YjgF-like [55298] (3 families) (S)
    forms trimers with three closely packed beta-sheets; possibly related to the IspF (d.79.5) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  2. 2180489d.79.2: Tubulin C-terminal domain-like [55307] (2 families) (S)
  3. 2180750d.79.3: L30e-like [55315] (4 families) (S)
  4. 2180891d.79.4: PurM N-terminal domain-like [55326] (2 families) (S)
  5. 2180995d.79.5: IpsF-like [69765] (2 families) (S)
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  6. 2181193d.79.6: Holliday junction resolvase RusA [103084] (1 family) (S)
    automatically mapped to Pfam PF05866
  7. 2181206d.79.7: OmpA-like [103088] (2 families) (S)
  8. 2181293d.79.8: YueI-like [160515] (1 family) (S)
    automatically mapped to Pfam PF07997
  9. 2181299d.79.9: BB2672-like [160519] (1 family) (S)
    contains extra N-terminal strand and a beta-hairpin insertion between strands 3 and 4 that packs against the main beta-sheet
    automatically mapped to Pfam PF06684

More info for Fold d.79: Bacillus chorismate mutase-like

Timeline for Fold d.79: Bacillus chorismate mutase-like: