SCOPe 2.02: Domain d1yoea_: 1yoe A:

Lineage for d1yoea_ (1yoe A:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.70: Nucleoside hydrolase [53589] (1 superfamily)
   core: 3 layers, a/b/a ; mixed beta-sheet of 8 strands, order 32145687; strand 7 is antiparallel to the rest

4. Superfamily c.70.1: Nucleoside hydrolase [53590] (2 families)

5. Family c.70.1.0: automated matches [191403] (1 protein)
   not a true family

6. Protein automated matches [190539] (4 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [188145] (1 PDB entry)

8. Domain d1yoea_: 1yoe A: [162274]
   automated match to d1q8fa_
   complexed with ca, rib

Details for d1yoea_

PDB Entry: 1yoe, 1.78 Å

PDB Description: crystal structure of a the e. coli pyrimidine nucleoside hydrolase ybek with bound ribose

PDB Compounds: (A:) Hypothetical protein ybeK

SCOPe Domain Sequences for d1yoea_:

Sequence, based on SEQRES records:

>d1yoea_ c.70.1.0 (A:) automated matches {Escherichia coli [TaxId: 562]}
gsalpilldcdpghddaiaivlalaspeldvkaitssagnqtpektlrnvlrmltllnrt
dipvaggavkplmreliiadnvhgesgldgpalpeptfapqnctavelmaktlresaepv
tivstgpqtnvalllnshpelhskiarivimggamglgnwtpaaefniyvdpeaaeivfq
sgipvvmagldvthkaqihvedterfraignpvstivaelldffleyhkdekwgfvgapl
hdpctiawllkpelftsverwvgvetqgkytqgmtvvdyyyltgnkpnatvmvdvdrqgf
vdlladrlkfya

Sequence, based on observed residues (ATOM records):

>d1yoea_ c.70.1.0 (A:) automated matches {Escherichia coli [TaxId: 562]}
gsalpilldcdpghddaiaivlalaspeldvkaitssagnqtpektlrnvlrmltllnrt
dipvaggavkplmreliiaesgldgpalpeptfapqnctavelmaktlresaepvtivst
gpqtnvalllnshpelhskiarivimggamglgnwtpaaefniyvdpeaaeivfqsgipv
vmagldvthkaqihvedterfraignpvstivaelldfflekwgfvgaplhdpctiawll
kpelftsverwvgvetqgkytqgmtvvdyyyltgnkpnatvmvdvdrqgfvdlladrlkf
ya

Timeline for d1yoea_:

• d1yoea_ first appeared in SCOPe 2.01
  
• d1yoea_ appears in SCOPe 2.03
  
• d1yoea_ appears in the current release, SCOPe 2.08, called d1yoea1