Lineage for d2ji7b2 (2ji7 B:7-194)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108260Family c.36.1.5: Pyruvate oxidase and decarboxylase Pyr module [88724] (8 protein domains)
    the N-terminal, Pyr module is separated from the C-terminal, PP module by an alpha/beta domain of Rossmann-like topology
    automatically mapped to Pfam PF02776
  6. 2108352Protein Oxalyl-CoA decarboxylase [142205] (1 species)
  7. 2108353Species Oxalobacter formigenes [TaxId:847] [142206] (6 PDB entries)
    Uniprot P40149 7-194
  8. 2108355Domain d2ji7b2: 2ji7 B:7-194 [148066]
    Other proteins in same PDB: d2ji7a1, d2ji7a3, d2ji7b1, d2ji7b3
    automated match to d2c31a2
    complexed with adp, b3p, mg, oxt, pge

Details for d2ji7b2

PDB Entry: 2ji7 (more details), 1.82 Å

PDB Description: x-ray structure of oxalyl-coa decarboxylase with covalent reaction intermediate
PDB Compounds: (B:) oxalyl-coa decarboxylase

SCOPe Domain Sequences for d2ji7b2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ji7b2 c.36.1.5 (B:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}

SCOPe Domain Coordinates for d2ji7b2:

Click to download the PDB-style file with coordinates for d2ji7b2.
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Timeline for d2ji7b2: