SCOPe 2.08: Domain d2gyaq1: 2gya Q:5-110

Lineage for d2gyaq1 (2gya Q:5-110)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.55: Ribosomal protein L22 [54842] (1 superfamily)
   beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation

4. Superfamily d.55.1: Ribosomal protein L22 [54843] (1 family)
   some topological similarity to prokaryotic ribosomal protein L17

5. Family d.55.1.1: Ribosomal protein L22 [54844] (1 protein)

6. Protein Ribosomal protein L22 [54845] (5 species)

7. Species Escherichia coli [TaxId:562] [160266] (29 PDB entries)
   Uniprot P61175 1-110

8. Domain d2gyaq1: 2gya Q:5-110 [145251]
   Other proteins in same PDB: d2gya11, d2gya31, d2gya32, d2gya51, d2gya52, d2gyab1, d2gyac1, d2gyad1, d2gyaf1, d2gyaf2, d2gyag1, d2gyag2, d2gyah1, d2gyai1, d2gyaj1, d2gyak1, d2gyam1, d2gyan1, d2gyao1, d2gyas1, d2gyat1, d2gyau1, d2gyaw1, d2gyax1

Details for d2gyaq1

PDB Entry: 2gya, 15 Å

PDB Description: Structure of the 50S subunit of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056

PDB Compounds: (Q:) 50S ribosomal protein L22

SCOPe Domain Sequences for d2gyaq1:

Sequence; same for both SEQRES and ATOM records:

>d2gyaq1 d.55.1.1 (Q:5-110) Ribosomal protein L22 {Escherichia coli [TaxId: 562]}
akhrharssaqkvrlvadlirgkkvsqaldiltytnkkaavlvkkvlesaianaehndga
diddlkvtkifvdegpsmkrimprakgradrilkrtshitvvvsdr

Timeline for d2gyaq1:

• d2gyaq1 first appeared in SCOP 1.75
  
• d2gyaq1 appears in SCOPe 2.07