Lineage for d2gyak1 (2gya K:3-133)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2168779Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
    core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
  4. 2169032Superfamily d.41.4: Ribosomal protein L16p/L10e [54686] (2 families) (S)
  5. 2169097Family d.41.4.2: Ribosomal protein L16p [117888] (1 protein)
    Pfam PF00252
  6. 2169098Protein Ribosomal protein L16p [117889] (4 species)
  7. 2169106Species Escherichia coli [TaxId:562] [143200] (29 PDB entries)
    Uniprot P0ADY7 1-136
  8. 2169134Domain d2gyak1: 2gya K:3-133 [135839]
    Other proteins in same PDB: d2gya11, d2gya31, d2gya32, d2gya51, d2gya52, d2gyab1, d2gyac1, d2gyad1, d2gyaf1, d2gyaf2, d2gyag1, d2gyag2, d2gyah1, d2gyai1, d2gyaj1, d2gyam1, d2gyan1, d2gyao1, d2gyaq1, d2gyas1, d2gyat1, d2gyau1, d2gyaw1, d2gyax1

Details for d2gyak1

PDB Entry: 2gya (more details), 15 Å

PDB Description: Structure of the 50S subunit of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
PDB Compounds: (K:) 50S ribosomal protein L16

SCOPe Domain Sequences for d2gyak1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2gyak1 d.41.4.2 (K:3-133) Ribosomal protein L16p {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2gyak1:

Click to download the PDB-style file with coordinates for d2gyak1.
(The format of our PDB-style files is described here.)

Timeline for d2gyak1: