SCOPe 2.03: Domain d2gyaf1: 2gya F:59-149

Lineage for d2gyaf1 (2gya F:59-149)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.99: Ribosomal protein L9 C-domain [55652] (1 superfamily)
   alpha-beta-alpha(2)-beta(2); 2 layers: alpha/beta

4. Superfamily d.99.1: Ribosomal protein L9 C-domain [55653] (1 family)
   automatically mapped to Pfam PF03948

5. Family d.99.1.1: Ribosomal protein L9 C-domain [55654] (1 protein)

6. Protein Ribosomal protein L9 C-domain [55655] (3 species)

7. Species Escherichia coli [TaxId:562] [160580] (29 PDB entries)
   Uniprot P0A7R1 59-149

8. Domain d2gyaf1: 2gya F:59-149 [145243]
   Other proteins in same PDB: d2gya11, d2gya31, d2gya32, d2gya51, d2gya52, d2gyab1, d2gyac1, d2gyad1, d2gyaf2, d2gyag1, d2gyag2, d2gyah1, d2gyai1, d2gyaj1, d2gyak1, d2gyam1, d2gyan1, d2gyao1, d2gyaq1, d2gyas1, d2gyat1, d2gyau1, d2gyaw1, d2gyax1
   automatically matched to 2AW4 H:59-149

Details for d2gyaf1

PDB Entry: 2gya, 15 Å

PDB Description: Structure of the 50S subunit of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056

PDB Compounds: (F:) 50S ribosomal protein L9

SCOPe Domain Sequences for d2gyaf1:

Sequence; same for both SEQRES and ATOM records:

>d2gyaf1 d.99.1.1 (F:59-149) Ribosomal protein L9 C-domain {Escherichia coli [TaxId: 562]}
aevlaaanaraekinaletvtiaskagdegklfgsigtrdiadavtaagvevaksevrlp
ngvlrttgehevsfqvhsevfakvivnvvae

Timeline for d2gyaf1:

• d2gyaf1 first appeared in SCOP 1.75
  
• d2gyaf1 appears in SCOPe 2.02
  
• d2gyaf1 appears in SCOPe 2.04
  
• d2gyaf1 appears in the current release, SCOPe 2.08