SCOPe 2.08: Domain d2dfka2: 2dfk A:240-401

Lineage for d2dfka2 (2dfk A:240-401)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.55: PH domain-like barrel [50728] (3 superfamilies)
   barrel, partly opened; n*=6, S*=12; meander; capped by an alpha-helix

4. Superfamily b.55.1: PH domain-like [50729] (14 families)

5. Family b.55.1.1: Pleckstrin-homology domain (PH domain) [50730] (48 proteins)
   Pfam PF00169

6. Protein Rho guanine nucleotide exchange factor 9, Collybistin [159209] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [159210] (1 PDB entry)
   Uniprot Q9QX73 300-461

8. Domain d2dfka2: 2dfk A:240-401 [145078]
   Other proteins in same PDB: d2dfka1, d2dfkb_, d2dfkc1, d2dfkd2, d2dfkd3
   complexed with gol, so4
   has additional insertions and/or extensions that are not grouped together

Details for d2dfka2

PDB Entry: 2dfk, 2.15 Å

PDB Description: Crystal structure of the CDC42-Collybistin II complex

PDB Compounds: (A:) collybistin II

SCOPe Domain Sequences for d2dfka2:

Sequence; same for both SEQRES and ATOM records:

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Norway rat (Rattus norvegicus) [TaxId: 10116]}
nidkiaqwqasvldwegddildrsseliytgemawiyqpygrnqqrvfflfdhqmvlckk
dlirrdilyykgridmdkyevidiedgrdddfnvsmknafklhnketeevhlffakklee
kirwlrafreerkmvqedekigfeisenqkrqaamtvrkask

Timeline for d2dfka2:

• d2dfka2 first appeared in SCOP 1.75
  
• d2dfka2 appears in SCOPe 2.07