SCOPe 2.08: Domain d2idkb_: 2idk B:

Lineage for d2idkb_ (2idk B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families)

5. Family c.66.1.5: Glycine N-methyltransferase [53348] (1 protein)

6. Protein Glycine N-methyltransferase [53349] (3 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [53350] (12 PDB entries)

8. Domain d2idkb_: 2idk B: [137281]
   automated match to d1bhja_
   complexed with c2f

Details for d2idkb_

PDB Entry: 2idk, 2.55 Å

PDB Description: crystal structure of rat glycine n-methyltransferase complexed with folate

PDB Compounds: (B:) glycine n-methyltransferase

SCOPe Domain Sequences for d2idkb_:

Sequence, based on SEQRES records:

>d2idkb_ c.66.1.5 (B:) Glycine N-methyltransferase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgagrdgapgfskfrl
syyphclasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

Sequence, based on observed residues (ATOM records):

>d2idkb_ c.66.1.5 (B:) Glycine N-methyltransferase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgafskfrlsyyphcl
asftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

Timeline for d2idkb_:

• d2idkb_ first appeared in SCOP 1.73, called d2idkb1
  
• d2idkb_ appears in SCOPe 2.07