Lineage for d2hbka1 (2hbk A:421-516)

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 916790Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 917285Superfamily a.60.8: HRDC-like [47819] (4 families) (S)
  5. 917320Family a.60.8.4: EXOSC10 HRDC domain-like [140646] (2 proteins)
  6. 917321Protein Exosome complex exonuclease RRP6 domain [140647] (1 species)
  7. 917322Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [140648] (4 PDB entries)
    Uniprot Q12149 421-516
  8. 917324Domain d2hbka1: 2hbk A:421-516 [136313]
    Other proteins in same PDB: d2hbka2
    automatically matched to 2HBJ A:421-516
    protein/RNA complex; complexed with mn

Details for d2hbka1

PDB Entry: 2hbk (more details), 2.25 Å

PDB Description: structure of the yeast nuclear exosome component, rrp6p, reveals an interplay between the active site and the hrdc domain; protein in complex with mn
PDB Compounds: (A:) Exosome complex exonuclease RRP6

SCOPe Domain Sequences for d2hbka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hbka1 a.60.8.4 (A:421-516) Exosome complex exonuclease RRP6 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2hbka1:

Click to download the PDB-style file with coordinates for d2hbka1.
(The format of our PDB-style files is described here.)

Timeline for d2hbka1:

View in 3D
Domains from same chain:
(mouse over for more information)