Lineage for d2gp4b2 (2gp4 B:1-418)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2242946Fold d.334: IlvD/EDD N-terminal domain-like [143974] (1 superfamily)
    contains a large cluster of helices and a mixed beta-sheet of 4 strands; order 2134, strands 3 and 4 are parallel
  4. 2242947Superfamily d.334.1: IlvD/EDD N-terminal domain-like [143975] (1 family) (S)
  5. 2242948Family d.334.1.1: lvD/EDD N-terminal domain-like [143976] (1 protein)
    N-terminal part of Pfam PF00920
  6. 2242949Protein 6-phosphogluconate dehydratase EDD [143977] (1 species)
  7. 2242950Species Shewanella oneidensis [TaxId:70863] [143978] (1 PDB entry)
    Uniprot Q8EEA0 1-418
  8. 2242952Domain d2gp4b2: 2gp4 B:1-418 [135451]
    Other proteins in same PDB: d2gp4a1, d2gp4a3, d2gp4b1, d2gp4b3
    automated match to d2gp4a2

Details for d2gp4b2

PDB Entry: 2gp4 (more details), 2.49 Å

PDB Description: Structure of [FeS]cluster-free Apo Form of 6-Phosphogluconate Dehydratase from Shewanella oneidensis
PDB Compounds: (B:) 6-phosphogluconate dehydratase

SCOPe Domain Sequences for d2gp4b2:

Sequence, based on SEQRES records: (download)

>d2gp4b2 d.334.1.1 (B:1-418) 6-phosphogluconate dehydratase EDD {Shewanella oneidensis [TaxId: 70863]}
mhsvvqsvtdriiarskasreaylaalndarnhgvhrsslscgnlahgfaacnpddknal
rqltkanigiitafndmlsahqpyetypdllkkacqevgsvaqvaggvpamcdgvtqgqp
gmelsllsreviamatavglshnmfdgalllgicdkivpglligalsfghlpmlfvpagp
mksgipnkekarirqqfaqgkvdraqlleaeaqsyhsagtctfygtansnqlmlevmglq
lpgssfvnpddplrealnkmaakqvcrltelgtqyspigevvneksivngivallatggs
tnltmhivaaaraagiivnwddfselsdavpllarvypnghadinhfhaaggmaflikel
ldagllhedvntvagyglrrytqepklldgelrwvdgptvsldtevltsvatpfqnng

Sequence, based on observed residues (ATOM records): (download)

>d2gp4b2 d.334.1.1 (B:1-418) 6-phosphogluconate dehydratase EDD {Shewanella oneidensis [TaxId: 70863]}
mhsvvqsvtdriiarskasreaylaalndarnhkacqevgsvaqvavpcdgvtqgqpgme
lsllsreviamatavglshnmfdgalllgickivpglligalsfghlpmlfvpagpqlml
evmglqlpgssfvnpddplrealnkmaakqvcrltelgtqyspigevvneksivngival
latggstnltmhivaaaraagiivnwddfselsdavpllarvypnghadinhfhaaggma
flikelldagllhedvntvagyglrrytqepklldgelrwvdgptvsldtevltsvatpf
qnng

SCOPe Domain Coordinates for d2gp4b2:

Click to download the PDB-style file with coordinates for d2gp4b2.
(The format of our PDB-style files is described here.)

Timeline for d2gp4b2: