SCOPe 2.04: Domain d2bq1e2: 2bq1 E:175-699

Lineage for d2bq1e2 (2bq1 E:175-699)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.7: PFL-like glycyl radical enzymes [51997] (1 superfamily)
   contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel

4. Superfamily c.7.1: PFL-like glycyl radical enzymes [51998] (5 families)
   duplication: the N- and C-terminal halves have similar topologies

5. Family c.7.1.2: R1 subunit of ribonucleotide reductase, C-terminal domain [52002] (1 protein)
   automatically mapped to Pfam PF02867

6. Protein R1 subunit of ribonucleotide reductase, C-terminal domain [52003] (2 species)

7. Species Salmonella typhimurium [TaxId:90371] [110447] (5 PDB entries)
   Uniprot Q08698

8. Domain d2bq1e2: 2bq1 E:175-699 [128954]
   Other proteins in same PDB: d2bq1e1, d2bq1f1, d2bq1i1, d2bq1j1
   automatically matched to d1pema2
   protein/DNA complex; complexed with dgt, fe, mg

Details for d2bq1e2

PDB Entry: 2bq1, 4 Å

PDB Description: Ribonucleotide reductase class 1b holocomplex R1E,R2F from Salmonella typhimurium

PDB Compounds: (E:) ribonucleoside-diphosphate reductase 2 alpha subunit

SCOPe Domain Sequences for d2bq1e2:

Sequence, based on SEQRES records:

>d2bq1e2 c.7.1.2 (E:175-699) R1 subunit of ribonucleotide reductase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
lvscfllriednmesigravnsalqlskrgggvafllsnlreagapikrienqssgvipv
mkmledafsyanqlgarqgagavylhahhpdilrfldtkrenadekiriktlslgvvipd
itfrlakenaqmalfspydiqrrygkpfgdiaiserydeliadphvrktyinardffqtl
aeiqfesgypyimfedtvnranpiagrinmsnlcseilqvnsasryddnldythighdis
cnlgslniahvmdspdigrtvetairgltavsdmshirsvpsiaagnaashaiglgqmnl
hgylaregiaygspealdftnlyfytitwhavhtsmrlarergktfagfaqsryasgdyf
tqylqddwqpktakvralfarsgitlptremwlklrddvmrygiynqnlqavpptgsisy
inhatssihpivakieirkegktgrvyypapfmtnenldmyqdaydigpekiidtyaeat
rhvdqglsltlffpdtattrdinkaqiyawrkgikslyyirlrql

Sequence, based on observed residues (ATOM records):

>d2bq1e2 c.7.1.2 (E:175-699) R1 subunit of ribonucleotide reductase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
lvscfllriednmesigravnsalqlskrgggvafllsnlreagapikrienqssgvipv
mkmledafsyanqgagavylhahhpdilrfldtkriktlslgvvipditfrlakenaqma
lfspydiqrrygkpfgdiaiserydeliadphvrktyinardffqtlaeiqfesgypyim
fedtvnranpiagrinmsnlcseilqvnsasryddnldythighdiscnlgslniahvmd
spdigrtvetairgltavsdmshirsvpsiaagnaashaiglgqmnlhgylaregiaygs
pealdftnlyfytitwhavhtsmrlarergktfagfaqsryasgdyftqylqddwqpkta
kvralfarsgitlptremwlklrddvmrygiynqnlqavpptgsisyinhatssihpiva
kieirkegktgrvyypapfmtnenldmyqdaydigpekiidtyaeatrhvdqglsltlff
pdtattrdinkaqiyawrkgikslyyirlrql

Timeline for d2bq1e2:

• d2bq1e2 first appeared in SCOP 1.73
  
• d2bq1e2 appears in SCOPe 2.03
  
• d2bq1e2 appears in SCOPe 2.05
  
• d2bq1e2 appears in the current release, SCOPe 2.08