SCOPe 2.02: Domain d2bera3: 2ber A:47-404

Lineage for d2bera3 (2ber A:47-404)

1. Root: SCOPe 2.02

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
   consists of six 4-stranded beta-sheet motifs; meander

4. Superfamily b.68.1: Sialidases [50939] (3 families)

5. Family b.68.1.1: Sialidases (neuraminidases) [50940] (10 proteins)

6. Protein Micromonospora sialidase, N-terminal domain [50946] (1 species)

7. Species Micromonospora viridifaciens [TaxId:1881] [50947] (8 PDB entries)
   Uniprot Q02834 47-647

8. Domain d2bera3: 2ber A:47-404 [128388]
   Other proteins in same PDB: d2bera1, d2bera2
   automatically matched to d1eur__
   complexed with na, slb; mutant

Details for d2bera3

PDB Entry: 2ber, 1.8 Å

PDB Description: y370g active site mutant of the sialidase from micromonospora viridifaciens in complex with beta-neu5ac (sialic acid).

PDB Compounds: (A:) bacterial sialidase

SCOPe Domain Sequences for d2bera3:

Sequence; same for both SEQRES and ATOM records:

>d2bera3 b.68.1.1 (A:47-404) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]}
geplyteqdlavngregfpnyripaltvtpdgdllasydgrptgidapgpnsilqrrstd
ggrtwgeqqvvsagqttapikgfsdpsylvdretgtifnfhvysqrqgfagsrpgtdpad
pnvlhanvatstdggltwshrtitaditpdpgwrsrfaasgegiqlrygphagrliqqyt
iinaagafqavsvysddhgrtwrageavgvgmdenktvelsdgrvllnsrdsarsgyrkv
avstdgghsygpvtidrdlpdptnnasiirafpdapagsarakvllfsnaasqtsrsqgt
irmscddgqtwpvskvfqpgsmsgstltalpdgtygllyepgtgiryanfnlawlggi

Timeline for d2bera3:

• d2bera3 first appeared in SCOP 1.73
  
• d2bera3 appears in SCOPe 2.01
  
• d2bera3 appears in SCOPe 2.03
  
• d2bera3 appears in the current release, SCOPe 2.08