SCOP 1.75: Domain d2b2ya1: 2b2y A:108-187

Lineage for d2b2ya1 (2b2y A:108-187)

1. Root: SCOP 1.75

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.13: Chromo domain-like [54160] (3 families)
   SH3-like barrel is capped by a C-terminal helix

5. Family b.34.13.2: Chromo domain [54165] (7 proteins)
   lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold

6. Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) [141220] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [141221] (5 PDB entries)
   Uniprot O14646 269-366! Uniprot O14646 270-355! Uniprot O14646 366-445! Uniprot O14646 367-443! Uniprot O14646 367-445

8. Domain d2b2ya1: 2b2y A:108-187 [127754]
   automatically matched to 2B2U A:108-187

Details for d2b2ya1

PDB Entry: 2b2y, 2.35 Å

PDB Description: tandem chromodomains of human chd1

PDB Compounds: (A:) Chromodomain-helicase-DNA-binding protein 1

SCOP Domain Sequences for d2b2ya1:

Sequence; same for both SEQRES and ATOM records:

>d2b2ya1 b.34.13.2 (A:108-187) ATP-dependent helicase CHD1 (Chromo domain protein 1) {Human (Homo sapiens) [TaxId: 9606]}
aspedveyyncqqeltddlhkqyqivgriiahsnqksaagypdyyckwqglpysecswed
galiskkfqacideyfsrkk

Timeline for d2b2ya1:

• d2b2ya1 first appeared in SCOP 1.73
  
• d2b2ya1 appears in SCOPe 2.01
  
• d2b2ya1 appears in the current release, SCOPe 2.08