SCOPe 2.07: Domain d1yxmd_: 1yxm D:

Lineage for d1yxmd_ (1yxm D:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

6. Protein Peroxisomal trans 2-enoyl CoA reductase [141884] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [141885] (1 PDB entry)
   Uniprot Q9BY49 7-303

8. Domain d1yxmd_: 1yxm D: [124195]
   automated match to d1yxma1
   complexed with ade, po4, so4

Details for d1yxmd_

PDB Entry: 1yxm, 1.9 Å

PDB Description: Crystal structure of peroxisomal trans 2-enoyl CoA reductase

PDB Compounds: (D:) peroxisomal trans 2-enoyl CoA reductase

SCOPe Domain Sequences for d1yxmd_:

Sequence, based on SEQRES records:

>d1yxmd_ c.2.1.2 (D:) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
rsylapgllqgqvaivtggatgigkaivkellelgsnvviasrklerlksaadelqanlp
ptkqarvipiqcnirneeevnnlvkstldtfgkinflvnngggqflspaehisskgwhav
letnltgtfymckavysswmkehggsivniivptkagfplavhsgaaragvynltkslal
ewacsgirincvapgviysqtavenygswgqsffegsfqkipakrigvpeevssvvcfll
spaasfitgqsvdvdggrslythsyevpdhdnwpkgagdlsvvkkmketfkekakl

Sequence, based on observed residues (ATOM records):

>d1yxmd_ c.2.1.2 (D:) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
rsylapgllqgqvaivtggatgigkaivkellelgsnvviasrklerlksaadelqanla
rvipiqcnirneeevnnlvkstldtfgkinflvnngggqflspaehisskgwhavletnl
tgtfymckavysswmkehggsivniivptkagfplavhsgaaragvynltkslalewacs
girincvapgviysqtavenygswgqsffegsfqkipakrigvpeevssvvcfllspaas
fitgqsvdvdggrslythsyevpdhdnwpkgagdlsvvkkmketfkekakl

Timeline for d1yxmd_:

• d1yxmd_ first appeared in SCOP 1.73, called d1yxmd1
  
• d1yxmd_ appears in SCOPe 2.06
  
• d1yxmd_ appears in the current release, SCOPe 2.08