SCOP 1.73: Domain d1y8tb1: 1y8t B:227-314

Lineage for d1y8tb1 (1y8t B:227-314)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.36: PDZ domain-like [50155] (1 superfamily)
   contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix

4. Superfamily b.36.1: PDZ domain-like [50156] (4 families)
   peptide-binding domain

5. Family b.36.1.4: HtrA-like serine proteases [74933] (4 proteins)

6. Protein Protease PepD [141288] (1 species)

7. Species Mycobacterium tuberculosis [TaxId:1773] [141289] (1 PDB entry)
   Rv0983

8. Domain d1y8tb1: 1y8t B:227-314 [122765]
   Other proteins in same PDB: d1y8ta2, d1y8tb2, d1y8tc2
   automatically matched to 1Y8T A:227-314

Details for d1y8tb1

PDB Entry: 1y8t, 2 Å

PDB Description: Crystal Structure of RV0983 from Mycobacterium tuberculosis- Proteolytically active form

PDB Compounds: (B:) hypothetical protein Rv0983

SCOP Domain Sequences for d1y8tb1:

Sequence, based on SEQRES records:

>d1y8tb1 b.36.1.4 (B:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
shaslgvqvtndkdtlgakivevvaggaaanagvpkgvvvtkvddrpinsadalvaavrs
kapgatvaltfqdpsggsrtvqvtlgka

Sequence, based on observed residues (ATOM records):

>d1y8tb1 b.36.1.4 (B:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
shaslgvqvtndkgakivevvaggaaanagvpkgvvvtkvddrpinsadalvaavrskap
gatvalttvqvtlgka

Timeline for d1y8tb1:

• d1y8tb1 is new in SCOP 1.73
  
• d1y8tb1 appears in SCOP 1.75
  
• d1y8tb1 appears in the current release, SCOPe 2.08