Lineage for d1y8tb1 (1y8t B:227-314)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 797796Fold b.36: PDZ domain-like [50155] (1 superfamily)
    contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
  4. 797797Superfamily b.36.1: PDZ domain-like [50156] (6 families) (S)
    peptide-binding domain
  5. 798093Family b.36.1.4: HtrA-like serine proteases [74933] (4 proteins)
  6. 798130Protein Protease PepD [141288] (1 species)
  7. 798131Species Mycobacterium tuberculosis [TaxId:1773] [141289] (2 PDB entries)
    Uniprot O53896 375-462
    Rv0983
  8. 798136Domain d1y8tb1: 1y8t B:227-314 [122765]
    Other proteins in same PDB: d1y8ta2, d1y8tb2, d1y8tc2
    automatically matched to 1Y8T A:227-314

Details for d1y8tb1

PDB Entry: 1y8t (more details), 2 Å

PDB Description: Crystal Structure of RV0983 from Mycobacterium tuberculosis- Proteolytically active form
PDB Compounds: (B:) hypothetical protein Rv0983

SCOP Domain Sequences for d1y8tb1:

Sequence, based on SEQRES records: (download)

>d1y8tb1 b.36.1.4 (B:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
shaslgvqvtndkdtlgakivevvaggaaanagvpkgvvvtkvddrpinsadalvaavrs
kapgatvaltfqdpsggsrtvqvtlgka

Sequence, based on observed residues (ATOM records): (download)

>d1y8tb1 b.36.1.4 (B:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
shaslgvqvtndkgakivevvaggaaanagvpkgvvvtkvddrpinsadalvaavrskap
gatvalttvqvtlgka

SCOP Domain Coordinates for d1y8tb1:

Click to download the PDB-style file with coordinates for d1y8tb1.
(The format of our PDB-style files is described here.)

Timeline for d1y8tb1: