SCOPe 2.06: Domain d1x71b_: 1x71 B:

Lineage for d1x71b_ (1x71 B:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.60: Lipocalins [50813] (1 superfamily)
   barrel, closed or opened; n=8, S=12; meander

4. Superfamily b.60.1: Lipocalins [50814] (10 families)
   bind hydrophobic ligands in their interior

5. Family b.60.1.1: Retinol binding protein-like [50815] (22 proteins)
   barrel, closed; n=8, S=12, meander

6. Protein Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [50836] (39 PDB entries)

8. Domain d1x71b_: 1x71 B: [121769]
   automated match to d1ngla_
   complexed with db1, fe

Details for d1x71b_

PDB Entry: 1x71, 2.1 Å

PDB Description: crystal structure of siderocalin (ngal, lipocalin 2) complexed with trencam-3,2-hopo, a cepabactin analogue

PDB Compounds: (B:) Neutrophil gelatinase-associated lipocalin

SCOPe Domain Sequences for d1x71b_:

Sequence, based on SEQRES records:

>d1x71b_ b.60.1.1 (B:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
tsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedks
ynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvff
kkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

Sequence, based on observed residues (ATOM records):

>d1x71b_ b.60.1.1 (B:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
tsdlipapplskvplqqnfqdnqfqgkwyvvglagnailrepqkmyatiyelkedksynv
tsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkkv
sqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

Timeline for d1x71b_:

• d1x71b_ first appeared in SCOP 1.73, called d1x71b1
  
• d1x71b_ appears in SCOPe 2.05
  
• d1x71b_ appears in SCOPe 2.07
  
• d1x71b_ appears in the current release, SCOPe 2.08