Lineage for d1rkia1 (1rki A:1-98)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3010566Fold d.308: THUMP domain [143436] (1 superfamily)
    contains mixed 8-stranded beta-sheet, folded into a half-barrel and covered with 4 helices on the outside; order 32148756; strands 5, 6 and 7 are parallel
  4. 3010567Superfamily d.308.1: THUMP domain-like [143437] (3 families) (S)
    predicted RNA-binding function
  5. 3010576Family d.308.1.2: PAE0736-like [143443] (1 protein)
    orphan protein; rudiment, disulfide-stabilized form of THUMP domain fold
    automatically mapped to Pfam PF11424
  6. 3010577Protein Hypothetical protein PAE0736 [143444] (1 species)
  7. 3010578Species Pyrobaculum aerophilum [TaxId:13773] [143445] (1 PDB entry)
    Uniprot Q8ZYK2 1-98
  8. 3010579Domain d1rkia1: 1rki A:1-98 [118776]
    Other proteins in same PDB: d1rkia2
    complexed with act, cl, p6g, pg4, so4

Details for d1rkia1

PDB Entry: 1rki (more details), 1.6 Å

PDB Description: Structure of pag5_736 from P. aerophilum with three disulphide bonds
PDB Compounds: (A:) hypothetical protein

SCOPe Domain Sequences for d1rkia1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rkia1 d.308.1.2 (A:1-98) Hypothetical protein PAE0736 {Pyrobaculum aerophilum [TaxId: 13773]}

SCOPe Domain Coordinates for d1rkia1:

Click to download the PDB-style file with coordinates for d1rkia1.
(The format of our PDB-style files is described here.)

Timeline for d1rkia1:

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