SCOPe 2.08: Domain d1xrsb1: 1xrs B:102-261

Lineage for d1xrsb1 (1xrs B:102-261)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
   3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

4. Superfamily c.23.6: Cobalamin (vitamin B12)-binding domain [52242] (1 family)

5. Family c.23.6.1: Cobalamin (vitamin B12)-binding domain [52243] (5 proteins)

6. Protein D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain [117477] (1 species)
   most similar to the glutamate mutase subunit

7. Species Clostridium sticklandii [TaxId:1511] [117478] (1 PDB entry)
   Uniprot Q9ZFE5

8. Domain d1xrsb1: 1xrs B:102-261 [115884]
   Other proteins in same PDB: d1xrsa_, d1xrsb2
   complexed with 5ad, b12, plp

Details for d1xrsb1

PDB Entry: 1xrs, 2.8 Å

PDB Description: crystal structure of lysine 5,6-aminomutase in complex with plp, cobalamin, and 5'-deoxyadenosine

PDB Compounds: (B:) D-lysine 5,6-aminomutase beta subunit

SCOPe Domain Sequences for d1xrsb1:

Sequence; same for both SEQRES and ATOM records:

>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
eilsmeetdeyikenigrkivvvgastgtdahtvgidaimnmkgyaghygleryemiday
nlgsqvanedfikkaveleadvllvsqtvtqknvhiqnmthlielleaeglrdrfvllcg
gprinneiakelgydagfgpgrfaddvatfavktlndrmn

Timeline for d1xrsb1:

• d1xrsb1 first appeared in SCOP 1.71
  
• d1xrsb1 appears in SCOPe 2.07