SCOPe 2.04: Domain d1x9yc1: 1x9y C:223-393

Lineage for d1x9yc1 (1x9y C:223-393)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (23 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.1: Papain-like [54002] (26 proteins)

6. Protein Staphopain SspB [102721] (1 species)

7. Species Staphylococcus aureus [TaxId:1280] [102722] (3 PDB entries)
   Uniprot Q70UQ9 41-393

8. Domain d1x9yc1: 1x9y C:223-393 [115015]
   Other proteins in same PDB: d1x9ya2, d1x9yb2, d1x9yc2, d1x9yd2

Details for d1x9yc1

PDB Entry: 1x9y, 2.5 Å

PDB Description: The prostaphopain B structure

PDB Compounds: (C:) cysteine proteinase

SCOPe Domain Sequences for d1x9yc1:

Sequence; same for both SEQRES and ATOM records:

>d1x9yc1 d.3.1.1 (C:223-393) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]}
qyentlknfkireqqfdnswcagfsmaallnatkntdtynahdimrtlypevseqdlpnc
atfpnqmieygksqgrdihyqegvpsynqvdqltkdnvgimilaqsvsqnpndphlghal
avvgnakindqekliywnpwdtelsiqdadssllhlsfnrdynwygsmigy

Timeline for d1x9yc1:

• d1x9yc1 first appeared in SCOP 1.71
  
• d1x9yc1 appears in SCOPe 2.03
  
• d1x9yc1 appears in SCOPe 2.05
  
• d1x9yc1 appears in the current release, SCOPe 2.08