SCOPe 2.04: Domain d1vcma1: 1vcm A:298-547

Lineage for d1vcma1 (1vcm A:298-547)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
   3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

4. Superfamily c.23.16: Class I glutamine amidotransferase-like [52317] (10 families)
   conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures

5. Family c.23.16.1: Class I glutamine amidotransferases (GAT) [52318] (12 proteins)
   contains a catalytic Cys-His-Glu triad

6. Protein CTP synthase PyrG, C-terminal domain [110481] (2 species)

7. Species Thermus thermophilus [TaxId:274] [110483] (3 PDB entries)
   Uniprot Q5SIA8

8. Domain d1vcma1: 1vcm A:298-547 [108504]
   Other proteins in same PDB: d1vcma2

Details for d1vcma1

PDB Entry: 1vcm, 2.35 Å

PDB Description: Crystal Structure of T.th. HB8 CTP synthetase

PDB Compounds: (A:) CTP synthetase

SCOPe Domain Sequences for d1vcma1:

Sequence, based on SEQRES records:

>d1vcma1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
ertvkiaiagkyvkmpdaylsllealrhagiknrarvevkwvdaesleaadldeafrdvs
gilvpggfgvrgiegkvraaqyarerkipylgiclglqiaviefarnvaglkganstefd
phtphpvidlmpeqleveglggtmrlgdwpmrikpgtllhrlygkeevlerhrhryevnp
lyvdgleraglvvsattpgmrgrgaglveaielkdhpfflglqshpefksrpmrpsppfv
gfveaalayq

Sequence, based on observed residues (ATOM records):

>d1vcma1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
ertvkiaiagkyvpdaylsllealrhagiknrarvevkwvdaesaadldeafrdvsgilv
pggfrgiegkvraaqyarerkipylgiclglqiaviefarnvaglkganstefdphtphp
vidlmpeqleveglggtmrlgdwpmrikpgtllhrlygkeevlerhrhryevnplyvdgl
eraglvvsattpgmrgrgaglveaielkdhpfflglqshpefksrpmrpsppfvgfveaa
layq

Timeline for d1vcma1:

• d1vcma1 first appeared in SCOP 1.69
  
• d1vcma1 appears in SCOPe 2.03
  
• d1vcma1 appears in SCOPe 2.05
  
• d1vcma1 appears in the current release, SCOPe 2.08