SCOPe 2.01: Domain d1nkga1: 1nkg A:251-337

Lineage for d1nkga1 (1nkg A:251-337)

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.3: Prealbumin-like [49451] (7 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands to common fold

4. Superfamily b.3.1: Starch-binding domain-like [49452] (3 families)

5. Family b.3.1.2: Rhamnogalacturonase B, RhgB, middle domain [110091] (1 protein)

6. Protein Rhamnogalacturonase B, RhgB, middle domain [110092] (1 species)

7. Species Fungus (Aspergillus aculeatus) [TaxId:5053] [110093] (1 PDB entry)
   Uniprot Q00019

8. Domain d1nkga1: 1nkg A:251-337 [103859]
   Other proteins in same PDB: d1nkga2, d1nkga3
   complexed with ca, so4

Details for d1nkga1

PDB Entry: 1nkg, 1.5 Å

PDB Description: rhamnogalacturonan lyase from aspergillus aculeatus

PDB Compounds: (A:) Rhamnogalacturonase B

SCOPe Domain Sequences for d1nkga1:

Sequence; same for both SEQRES and ATOM records:

>d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
yvaasgrgkvagtasgadssmdwvvhwyndaaqywtytsssgsftspamkpgtytmvyyq
geyavatssvtvsagstttknisgsvk

Timeline for d1nkga1:

• d1nkga1 first appeared in SCOP 1.69
  
• d1nkga1 appears in SCOP 1.75
  
• d1nkga1 appears in SCOPe 2.02
  
• d1nkga1 appears in the current release, SCOPe 2.08