Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2344610Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2346703Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 2346843Species Norway rat (Rattus norvegicus) [TaxId:10116] [101504] (7 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1oaq:
  2. Domain(s) for 1oar:
    1. 2346849Domain d1oarl_: 1oar L: [92713]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    2. 2346850Domain d1oarm_: 1oar M: [92714]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    3. 2346851Domain d1oarn_: 1oar N: [92715]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    4. 2346852Domain d1oaro_: 1oar O: [92716]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
  3. Domain(s) for 1oau:
    1. 2346845Domain d1oaul_: 1oau L: [92721]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    2. 2346846Domain d1oaum_: 1oau M: [92722]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    3. 2346847Domain d1oaun_: 1oau N: [92723]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    4. 2346848Domain d1oauo_: 1oau O: [92724]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
  4. Domain(s) for 1oax:
    1. 2346858Domain d1oaxl_: 1oax L: [92729]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    2. 2346859Domain d1oaxm_: 1oax M: [92730]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    3. 2346860Domain d1oaxn_: 1oax N: [92731]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    4. 2346861Domain d1oaxo_: 1oax O: [92732]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
  5. Domain(s) for 1oay:
    1. 2346854Domain d1oayl_: 1oay L: [92737]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    2. 2346855Domain d1oaym_: 1oay M: [92738]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    3. 2346856Domain d1oayn_: 1oay N: [92739]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    4. 2346857Domain d1oayo_: 1oay O: [92740]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
  6. Domain(s) for 1oaz:
    1. 2346862Domain d1oazl_: 1oaz L: [92745]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
      part of IgE Fv spe-7
    2. 2346863Domain d1oazn_: 1oaz N: [92746]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
      part of IgE Fv spe-7
  7. Domain(s) for 1ocw:

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda: