Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2019185Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 2019324Species Norway rat (Rattus norvegicus) [TaxId:10116] [101504] (7 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1oaq:
  2. Domain(s) for 1oar:
    1. 2019330Domain d1oarl_: 1oar L: [92713]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    2. 2019331Domain d1oarm_: 1oar M: [92714]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    3. 2019332Domain d1oarn_: 1oar N: [92715]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
    4. 2019333Domain d1oaro_: 1oar O: [92716]
      Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_
      part of IgE Fv spe-7
      complexed with azn, cac, cl, dms, edo, na
  3. Domain(s) for 1oau:
    1. 2019326Domain d1oaul_: 1oau L: [92721]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    2. 2019327Domain d1oaum_: 1oau M: [92722]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    3. 2019328Domain d1oaun_: 1oau N: [92723]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
    4. 2019329Domain d1oauo_: 1oau O: [92724]
      Other proteins in same PDB: d1oauh_, d1oaui_, d1oauj_, d1oauk_
      part of IgE Fv spe-7
      complexed with dnf, imd, ser
  4. Domain(s) for 1oax:
    1. 2019339Domain d1oaxl_: 1oax L: [92729]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    2. 2019340Domain d1oaxm_: 1oax M: [92730]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    3. 2019341Domain d1oaxn_: 1oax N: [92731]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
    4. 2019342Domain d1oaxo_: 1oax O: [92732]
      Other proteins in same PDB: d1oaxh_, d1oaxj_
      part of IgE Fv spe-7
      complexed with anq
  5. Domain(s) for 1oay:
    1. 2019335Domain d1oayl_: 1oay L: [92737]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    2. 2019336Domain d1oaym_: 1oay M: [92738]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    3. 2019337Domain d1oayn_: 1oay N: [92739]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
    4. 2019338Domain d1oayo_: 1oay O: [92740]
      Other proteins in same PDB: d1oayh_, d1oayj_
      part of IgE Fv spe-7
      complexed with fur
  6. Domain(s) for 1oaz:
    1. 2019343Domain d1oazl_: 1oaz L: [92745]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
      part of IgE Fv spe-7
    2. 2019344Domain d1oazn_: 1oaz N: [92746]
      Other proteins in same PDB: d1oaza_, d1oazb_, d1oazh_, d1oazj_
      part of IgE Fv spe-7
  7. Domain(s) for 1ocw:

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda: