SCOPe 2.08: Domain d1vh1b_: 1vh1 B:

Lineage for d1vh1b_ (1vh1 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.13: Cytidylytransferase [68901] (7 proteins)

6. Protein CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase [64143] (3 species)

7. Species Escherichia coli, KdsB [TaxId:562] [102606] (1 PDB entry)

8. Domain d1vh1b_: 1vh1 B: [100633]
   structural genomics

Details for d1vh1b_

PDB Entry: 1vh1, 2.6 Å

PDB Description: Crystal structure of CMP-KDO synthetase

PDB Compounds: (B:) 3-deoxy-manno-octulosonate cytidylyltransferase

SCOPe Domain Sequences for d1vh1b_:

Sequence, based on SEQRES records:

>d1vh1b_ c.68.1.13 (B:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]}
sfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaa
ggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqv
gmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrh
lgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedle
rvraem

Sequence, based on observed residues (ATOM records):

>d1vh1b_ c.68.1.13 (B:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]}
sfvviiparygkplvdingkpmivhvleraresgaeriivatdhedvaraveaaggevcm
traterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqvgmatlavpihn
aeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrhlgiygyragfi
rryvnwqpsplehiemleqlrvlwygekihvavaedlervraem

Timeline for d1vh1b_:

• d1vh1b_ first appeared in SCOP 1.67
  
• d1vh1b_ appears in SCOPe 2.07