PDB entry 1vh1
View 1vh1 on RCSB PDB site
Description: Crystal structure of CMP-KDO synthetase
Class: Transferase
Keywords: structural genomics, Transferase
Deposited on
2003-12-01, released
2003-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.24
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
Species: Escherichia coli [TaxId:562]
Gene: KDSB, B0918
Database cross-references and differences (RAF-indexed):
- Uniprot P04951 (1-End)
- modified residue (28)
- modified residue (66)
- modified residue (102)
- modified residue (122)
- modified residue (207)
- modified residue (246)
Domains in SCOPe 2.08: d1vh1a_ - Chain 'B':
Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
Species: Escherichia coli [TaxId:562]
Gene: KDSB, B0918
Database cross-references and differences (RAF-indexed):
- Uniprot P04951 (1-End)
- modified residue (28)
- modified residue (66)
- modified residue (102)
- modified residue (122)
- modified residue (207)
- modified residue (246)
Domains in SCOPe 2.08: d1vh1b_ - Chain 'C':
Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
Species: Escherichia coli [TaxId:562]
Gene: KDSB, B0918
Database cross-references and differences (RAF-indexed):
- Uniprot P04951 (1-End)
- modified residue (28)
- modified residue (66)
- modified residue (102)
- modified residue (122)
- modified residue (207)
- modified residue (246)
Domains in SCOPe 2.08: d1vh1c_ - Chain 'D':
Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
Species: Escherichia coli [TaxId:562]
Gene: KDSB, B0918
Database cross-references and differences (RAF-indexed):
- Uniprot P04951 (1-End)
- modified residue (28)
- modified residue (66)
- modified residue (102)
- modified residue (122)
- modified residue (207)
- modified residue (246)
Domains in SCOPe 2.08: d1vh1d_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vh1A (A:)
msfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaravea
aggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrq
vgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflr
hlgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedl
ervraemrgshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1vh1A (A:)
sfvviiparyastpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaagg
evcmtrgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqvgmatlav
pihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrhlgiygyr
agfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedlervraem
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1vh1B (B:)
msfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaravea
aggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrq
vgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflr
hlgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedl
ervraemrgshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1vh1B (B:)
sfvviiparygkplvdingkpmivhvleraresgaeriivatdhedvaraveaaggevcm
traterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqvgmatlavpihn
aeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrhlgiygyragfi
rryvnwqpsplehiemleqlrvlwygekihvavaedlervraem
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1vh1C (C:)
msfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaravea
aggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrq
vgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflr
hlgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedl
ervraemrgshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1vh1C (C:)
sfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaa
ggevcmtqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqvgmat
lavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfavgdnflrhlgiygyrag
firryvnwqpsplehiemleqlrvlwygekihvavaqegvdtpedlervraem
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1vh1D (D:)
msfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaravea
aggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrq
vgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflr
hlgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedl
ervraemrgshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1vh1D (D:)
sfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaa
ggevcmtsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqvgmatl
avpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrhlgiyg
yragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedlervrae
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