SCOPe 2.08: Domain d1yp2a2: 1yp2 A:10-316

Lineage for d1yp2a2 (1yp2 A:10-316)

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)
Family c.68.1.6: glucose-1-phosphate thymidylyltransferase [53464] (4 proteins)
automatically mapped to Pfam PF00483
Protein Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain [142688] (1 species)
Species Potato (Solanum tuberosum) [TaxId:4113] [142689] (3 PDB entries)
Uniprot P23509 80-386
Domain d1yp2a2: 1yp2 A:10-316 [123799]
Other proteins in same PDB: d1yp2a1, d1yp2b1, d1yp2c1, d1yp2d1
complexed with pmb, so4

Details for d1yp2a2

PDB Entry: 1yp2 (more details), 2.11 Å

PDB Description: Crystal structure of potato tuber ADP-glucose pyrophosphorylase

PDB Compounds: (A:) Glucose-1-phosphate adenylyltransferase small subunit

SCOPe Domain Sequences for d1yp2a2:

Sequence, based on SEQRES records: (download)

>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]}
qtcldpdasrsvlgiilgggagtrlypltkkrakpavplganyrlidipvsnclnsnisk
iyvltqfnsaslnrhlsrayasnmggyknegfvevlaaqqspenpdwfqgtadavrqylw
lfeehtvleylilagdhlyrmdyekfiqahretdaditvaalpmdekratafglmkidee
griiefaekpqgeqlqamkvdttilglddkrakempfiasmgiyviskdvmlnllrdkfp
gandfgsevipgatslgmrvqaylydgywedigtieafynanlgitkkpvpdfsfydrsa
piytqpr

Sequence, based on observed residues (ATOM records): (download)

>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]}
qtcldpdasrsvlgiilrlypltkkrakpavplganyrlidipvsnclnsniskiyvltq
fnsaslnrhlsrayaegfvevlaaqqspenpdwfqgtadavrqylwlfeehtvleylila
gdhlyrmdyekfiqahretdaditvaalpmdekratafglmkideegriiefaekpqgeq
lqamkvdttilglddkrakempfiasmgiyviskdvmlnllrdkfpgandfgsevipgat
slgmrvqaylydgywedigtieafynanlgitkkpvpdfsfydrsapiytqpr

SCOPe Domain Coordinates for d1yp2a2:

Click to download the PDB-style file with coordinates for d1yp2a2.
(The format of our PDB-style files is described here.)

Timeline for d1yp2a2: