Lineage for d1vhya2 (1vhy A:74-247)
- Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds) 
Fold c.116: alpha/beta knot [75216] (1 superfamily)
core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knotSuperfamily c.116.1: alpha/beta knot [75217] (9 families) 
known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
all known members have dimeric structures
Family c.116.1.5: YggJ C-terminal domain-like [89632] (4 proteins)
contains extra strand (3) in the parallel beta-sheet, order 321546; similar dimerisation to the MTH1 domain
Protein Hypothetical protein HI0303 [89633] (1 species) Species Haemophilus influenzae [TaxId:727] [89634] (2 PDB entries) 
Domain d1vhya2: 1vhy A:74-247 [100715]
Other proteins in same PDB: d1vhya1, d1vhyb1
structural genomics
Details for d1vhya2
PDB Entry: 1vhy (more details), 1.9 Å
PDB Description: crystal structure of haemophilus influenzae protein hi0303, pfam duf558
PDB Compounds: (A:) Hypothetical protein HI0303SCOPe Domain Sequences for d1vhya2:
Sequence, based on SEQRES records: (download)
>d1vhya2 c.116.1.5 (A:74-247) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
keshlkihlgqvisrgermeftiqksvelgvnvitplwsercgvkldaermdkkiqqwqk
iaiaaceqcgrnivpeirplmklqdwcaendgalklnlhprahysiktlptipaggvrll
igsegglsaqeiaqteqqgfteillgkrvlrtetaslaaisalqicfgdlgeeg
Sequence, based on observed residues (ATOM records): (download)
>d1vhya2 c.116.1.5 (A:74-247) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
keshlkihlgqvirmeftiqksvelgvnvitplwsercgvkldaermdkkiqqwqkiaia
aceqcgrnivpeirplmklqdwcaendgalklnlhprahysiktlptipaggvrlligse
gglsaqeiaqteqqgfteillgkrvlrtetaslaaisalqicfgdlgeeg
SCOPe Domain Coordinates for d1vhya2:
Click to download the PDB-style file with coordinates for d1vhya2.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d1vhya2:
- d1vhya2 first appeared in SCOP 1.67
- d1vhya2 appears in SCOPe 2.02
- d1vhya2 appears in SCOPe 2.04
- d1vhya2 appears in the current release, SCOPe 2.08
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