Lineage for d1mswd_ (1msw D:)

  1. Root: SCOPe 2.07
  2. 2618030Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2622069Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2622070Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2622993Family e.8.1.3: T7 RNA polymerase [56691] (2 proteins)
  6. 2622994Protein T7 RNA polymerase [56692] (1 species)
    multidomain; mostly alpha
  7. 2622995Species Bacteriophage T7 [TaxId:10760] [56693] (11 PDB entries)
  8. 2622996Domain d1mswd_: 1msw D: [79427]
    elongation complex; shows dramatic conformational changes in the transition from initiation to elongation transcription
    protein/DNA complex; protein/RNA complex

Details for d1mswd_

PDB Entry: 1msw (more details), 2.1 Å

PDB Description: Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase
PDB Compounds: (D:) DNA-directed RNA polymerase

SCOPe Domain Sequences for d1mswd_:

Sequence, based on SEQRES records: (download)

>d1mswd_ e.8.1.3 (D:) T7 RNA polymerase {Bacteriophage T7 [TaxId: 10760]}
ntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlka
gevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikt
tlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykka
fmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqnagvvgqds
etielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrths
kkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelp
mkpedidmnpealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmd
wrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikf
ieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscs
giqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtden
tgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaids
gkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrk
rcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrlqptintnkdseidahkqesgiapn
fvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdv
ladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa

Sequence, based on observed residues (ATOM records): (download)

>d1mswd_ e.8.1.3 (D:) T7 RNA polymerase {Bacteriophage T7 [TaxId: 10760]}
ntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlka
gevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikt
tlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykka
fmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqsetielape
yaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmrye
dvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmktawkra
aaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmt
kglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplent
wwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravn
llpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqw
laygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaidsgkglmftqpnqaagymakl
iwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeyk
kpiqtrlnlmflgqfrlqptintnkdseidahkqesgiapnfvhsqdgshlrktvvwahe
kygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldk
mpalpakgnlnlrdilesdfafa

SCOPe Domain Coordinates for d1mswd_:

Click to download the PDB-style file with coordinates for d1mswd_.
(The format of our PDB-style files is described here.)

Timeline for d1mswd_: