PDB entry 6rk7

View 6rk7 on RCSB PDB site
Description: Inter-dimeric interface controls function and stability of S-methionine adenosyltransferase from U. urealiticum
Class: transferase
Keywords: synthetase, TRANSFERASE
Deposited on 2019-04-30, released 2019-09-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-09-25, with a file datestamp of 2019-09-20.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Methionine adenosyltransferase
    Species: Ureaplasma urealyticum serovar 7 str. ATCC 27819 [TaxId:519849]
    Gene: metK, UUR7_0462
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2NE58 (Start-375)
      • expression tag (376)
    Domains in SCOPe 2.07: d6rk7a1, d6rk7a2, d6rk7a3, d6rk7a4
  • Chain 'B':
    Compound: Methionine adenosyltransferase
    Species: Ureaplasma urealyticum serovar 7 str. ATCC 27819 [TaxId:519849]
    Gene: metK, UUR7_0462
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6rk7b1, d6rk7b2, d6rk7b3
  • Chain 'E':
    Compound: Methionine adenosyltransferase
    Species: Ureaplasma urealyticum serovar 7 str. ATCC 27819 [TaxId:519849]
    Gene: metK, UUR7_0462
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6rk7e1, d6rk7e2, d6rk7e3
  • Chain 'F':
    Compound: Methionine adenosyltransferase
    Species: Ureaplasma urealyticum serovar 7 str. ATCC 27819 [TaxId:519849]
    Gene: metK, UUR7_0462
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6rk7f1, d6rk7f2, d6rk7f3
  • Chain 'G':
    Compound: Methionine adenosyltransferase
    Species: Ureaplasma urealyticum serovar 7 str. ATCC 27819 [TaxId:519849]
    Gene: metK, UUR7_0462
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2NE58 (Start-375)
      • expression tag (376)
    Domains in SCOPe 2.07: d6rk7g1, d6rk7g2, d6rk7g3, d6rk7g4
  • Chain 'H':
    Compound: Methionine adenosyltransferase
    Species: Ureaplasma urealyticum serovar 7 str. ATCC 27819 [TaxId:519849]
    Gene: metK, UUR7_0462
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6rk7h1, d6rk7h2, d6rk7h3
  • Heterogens: SAM, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6rk7A (A:)
    mqykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitt
    hayvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgy
    acdetpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvs
    iqhdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkii
    vdtyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqp
    vamyvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldl
    sweklnkvedliknskhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6rk7A (A:)
    kkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitthay
    vdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgyacd
    etpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvsiqh
    dedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkiivdt
    yggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqpvam
    yvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldlswe
    klnkvedliknskh
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6rk7B (B:)
    mqykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitt
    hayvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgy
    acdetpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvs
    iqhdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkii
    vdtyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqp
    vamyvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldl
    sweklnkvedliknskhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6rk7B (B:)
    ykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageittha
    yvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgyac
    detpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvsiq
    hdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkiivd
    tyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqpva
    myvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldlsw
    eklnkvedliknsk
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6rk7E (E:)
    mqykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitt
    hayvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgy
    acdetpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvs
    iqhdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkii
    vdtyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqp
    vamyvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldl
    sweklnkvedliknskhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6rk7E (E:)
    qykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitth
    ayvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgya
    cdetpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvsi
    qhdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkiiv
    dtyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqpv
    amyvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldls
    weklnkvedliknsk
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6rk7F (F:)
    mqykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitt
    hayvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgy
    acdetpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvs
    iqhdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkii
    vdtyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqp
    vamyvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldl
    sweklnkvedliknskhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6rk7F (F:)
    ykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageittha
    yvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgyac
    detpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvsiq
    hdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkiivd
    tyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqpva
    myvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldlsw
    eklnkvedliknsk
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6rk7G (G:)
    mqykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitt
    hayvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgy
    acdetpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvs
    iqhdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkii
    vdtyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqp
    vamyvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldl
    sweklnkvedliknskhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6rk7G (G:)
    ykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageittha
    yvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgyac
    detpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvsiq
    hdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkiivd
    tyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqpva
    myvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldlsw
    eklnkvedliknskh
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6rk7H (H:)
    mqykkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitt
    hayvdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgy
    acdetpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvs
    iqhdedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkii
    vdtyggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqp
    vamyvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldl
    sweklnkvedliknskhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6rk7H (H:)
    kkiitsesvgaghpdkicdqisdaildeclsqdqnsrvacevlacnrliviageitthay
    vdvvktaweiikplgydendftiisnvnkqsvdiaqsvdktnknligagdqgivfgyacd
    etpqympltsvlahellkeierqrrskefikiqadmksqvsidysnstplietmlvsiqh
    dedydveyfnkkvsaimeqiakkynlntnfkkiinssgrfviggpigdtgltgrkiivdt
    yggvghhgggafsgkdptkvdrsasyfarwiaknvvaaklakqceiqlafaigqpqpvam
    yvntfntnlidetkifeaikksfnfdiktfindlnlwttkylpvatyghfgrddldlswe
    klnkvedliknsk