PDB entry 6r3p

View 6r3p on RCSB PDB site
Description: Crystal structure of human DMC1 ATPase domain
Class: recombination
Keywords: Recombinase, Homologous recombination, Strand invasion, Meiosis, RECOMBINATION
Deposited on 2019-03-20, released 2019-04-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-04-03, with a file datestamp of 2019-03-29.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q14565 (3-260)
      • expression tag (2)
    Domains in SCOPe 2.07: d6r3pa1, d6r3pa2
  • Chain 'B':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6r3pb_
  • Chain 'C':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q14565 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.07: d6r3pc1, d6r3pc2
  • Chain 'D':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q14565 (3-260)
      • expression tag (2)
    Domains in SCOPe 2.07: d6r3pd1, d6r3pd2
  • Heterogens: EDO, PEG, PG4, P6G, 1PE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6r3pA (A:)
gsmpgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtl
cvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehq
melldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkisee
ynvavfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydsp
empeneatfaitaggigdake

    Sequence, based on observed residues (ATOM records): (download) 
    >6r3pA (A:)
mpgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcv
taqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqme
lldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeyn
vavfvtnqmtkkpigghilahasttrislrkgrgelriakiydspempeneatfaitagg
igdake

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6r3pB (B:)
gsmpgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtl
cvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehq
melldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkisee
ynvavfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydsp
empeneatfaitaggigdake

    Sequence, based on observed residues (ATOM records): (download) 
    >6r3pB (B:)
pgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvt
aqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmel
ldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynv
avfvtnqmtakkpigghilahasttrislrkgrgelriakiydspempeneatfaitagg
igdake

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6r3pC (C:)
gsmpgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtl
cvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehq
melldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkisee
ynvavfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydsp
empeneatfaitaggigdake

    Sequence, based on observed residues (ATOM records): (download) 
    >6r3pC (C:)
smpgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlc
vtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqm
elldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseey
nvavfvtnqmtapkkpigghilahasttrislrkgrgelriakiydspempeneatfait
aggigda

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6r3pD (D:)
gsmpgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtl
cvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehq
melldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkisee
ynvavfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydsp
empeneatfaitaggigdake

    Sequence, based on observed residues (ATOM records): (download) 
    >6r3pD (D:)
mpgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcv
taqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqme
lldyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeyn
vavfvtnqmtkkpigghilahasttrislrkgrgelriakiydspempeneatfaitagg
igdake