PDB entry 5xjf
View 5xjf on RCSB PDB site
Description: Crystal structure of fucosylated IgG Fc Y296W mutant complexed with bis-glycosylated soluble form of Fc gamma receptor IIIa
Class: immune system
Keywords: immune system, complex, fc fragment, igg, receptor, cd16, gamma
Deposited on
2017-05-01, released
2017-11-01
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Immunoglobulin gamma-1 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5xjfa1, d5xjfa2 - Chain 'B':
Compound: Immunoglobulin gamma-1 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5xjfb1, d5xjfb2 - Chain 'C':
Compound: Low affinity immunoglobulin gamma Fc region receptor III-A
Species: Homo sapiens [TaxId:9606]
Gene: FCGR3A, CD16A, FCG3, FCGR3, IGFR3
Database cross-references and differences (RAF-indexed):
- Uniprot P08637
- engineered mutation (155)
- engineered mutation (166)
Domains in SCOPe 2.07: d5xjfc1, d5xjfc2 - Heterogens: NAG, BMA, MAN, GAL, FUC, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5xjfA (A:)
tcppcpapellggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvev
hnaktkpreeqwnstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqpr
epqvytlppsrdeltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsf
flyskltvdksrwqqgnvfscsvmhealhnhytqkslslspgk
Sequence, based on observed residues (ATOM records): (download)
>5xjfA (A:)
papellggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnakt
kpreeqwnstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvy
tlppsrdeltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsfflysk
ltvdksrwqqgnvfscsvmhealhnhytqkslsls
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5xjfB (B:)
tcppcpapellggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvev
hnaktkpreeqwnstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqpr
epqvytlppsrdeltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsf
flyskltvdksrwqqgnvfscsvmhealhnhytqkslslspgk
Sequence, based on observed residues (ATOM records): (download)
>5xjfB (B:)
papellggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnakt
kpreeqwnstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvy
tlppsrdeltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsfflysk
ltvdksrwqqgnvfscsvmhealhnhytqkslsls
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5xjfC (C:)
edlpkavvflepqwyrvlekdsvtlkcqgayspedqstqwfhneslissqassyfidaat
vddsgeyrcqtqlstlsdpvqlevhigwlllqaprwvfkeedpihlrchswkntalhkvt
ylqngkgrkyfhhnsdfyipkatlkdsgsyfcrglvgsknvssetvqititqghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5xjfC (C:)
vflepqwyrvlekdsvtlkcqwfhneslissqyfidaatvddsgeyrcqtstlsdpvqle
vhigwlllqaprwvfkeedpihlrchswkntalhkvtylqngkgrkyfhhnsdfyipkat
lkdsgsyfcrglvgsknvssetvqititq