PDB entry 5kin

View 5kin on RCSB PDB site
Description: Crystal structure of tryptophan synthase alpha beta complex from Streptococcus pneumoniae
Class: lyase
Keywords: Structural Genomics, CSGID, tryptophan synthase A, tryptophan synthase B, Center for Structural Genomics of Infectious Diseases, LYASE
Deposited on 2016-06-16, released 2016-07-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-09-18, with a file datestamp of 2019-09-13.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tryptophan synthase alpha chain
    Species: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) [TaxId:170187]
    Gene: trpA, SP_1811
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5kina_
  • Chain 'B':
    Compound: tryptophan synthase beta chain
    Species: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) [TaxId:170187]
    Gene: trpB, SP_1812
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5kinb_
  • Chain 'C':
    Compound: tryptophan synthase alpha chain
    Species: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) [TaxId:170187]
    Gene: trpA, SP_1811
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5kinc_
  • Chain 'D':
    Compound: tryptophan synthase beta chain
    Species: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) [TaxId:170187]
    Gene: trpB, SP_1812
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5kind_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5kinA (A:)
mpktlteklnaikaagkgifvpyimagdhekgldglaetihfledlgvsaievgipfsdp
vadgpvieeaglrslahgtstqalvetlktieteiplvimtyfnplfqygvenfvkdlad
tavkgliipdlphehanfvepflantdialiplvslttgierqkeliegaegfiyavain
gvtgksgnyradldkhlaqlhqvadipvltgfgvssqadlerfnavsdgvivgskivkal
hqgepiqdfirqavayqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5kinA (A:)
pktlteklnaikaagkgifvpyimagdhekgldglaetihfledlgvsaievgipfsdpv
adgpvieeaglrslahgtstqalvetlktieteiplvimtyfnplfqygvenfvkdladt
avkgliipdlphehanfvepflantdialiplvslttgierqkeliegaegfiyavaira
dldkhlaqlhqvadipvltgfgvssqadlerfnavsdgvivgskivkalhqgepiqdfir
qavayqk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5kinB (B:)
snaqepnkdgfygkfggrfvpetlmtavlelekayresqadpsfqeelnqllrqyvgret
plyyaknltqhiggakiylkredlnhtgahkinnalgqvwlakrmgkkkiiaetgagqhg
vatataaalfnmectiymgeedvkrqalnvfrmellgakveavtdgsrvlkdavnaalrs
wvaniddthyilgsalgphpfpeivrdfqsvigreakqqyrdltgrdlpdalvacvgggs
naiglfhpfvedesvamygteaaglgvdtehhaatltkgrpgvlhgslmdvlqdahgqil
eafsisagldypgigpehshyhdikrasyvpvtdeealegfqllsrvegiipalesshai
afavklakelgpeksmivclsgrgdkdvvqvkdrleadaakkgeaha

    Sequence, based on observed residues (ATOM records): (download) 
    >5kinB (B:)
qepnkdgfygkfggrfvpetlmtavlelekayresqadpsfqeelnqllrqyvgretply
yaknltqhiggakiylkredlnhtgahkinnalgqvwlakrmgkkkiiaetgagqhgvat
ataaalfnmectiymgeedvkrqalnvfrmellgakveavtdgsrvlkdavnaalrswva
niddthyilgsalgphpfpeivrdfqsvigreakqqyrdltgrdlpdalvacvgggsnai
glfhpfvedesvamygteaaglgvdtehhaatltkgrpgvlhgslmdvlqdahgqileaf
sisagldypgigpehshyhdikrasyvpvtdeealegfqllsrvegiipalesshaiafa
vklakelgpeksmivclsgrgdkdvvqvkdrleadaakk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5kinC (C:)
mpktlteklnaikaagkgifvpyimagdhekgldglaetihfledlgvsaievgipfsdp
vadgpvieeaglrslahgtstqalvetlktieteiplvimtyfnplfqygvenfvkdlad
tavkgliipdlphehanfvepflantdialiplvslttgierqkeliegaegfiyavain
gvtgksgnyradldkhlaqlhqvadipvltgfgvssqadlerfnavsdgvivgskivkal
hqgepiqdfirqavayqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5kinC (C:)
mpktlteklnaikaagkgifvpyimagdhekgldglaetihfledlgvsaievgipfsdp
vadgpvieeaglrslahgtstqalvetlktieteiplvimtyfnplfqygvenfvkdlad
tavkgliipdlphehanfvepflantdialiplvslttgierqkeliegaegfiyavain
gnyradldkhlaqlhqvadipvltgfgvssqadlerfnavsdgvivgskivkalhqgepi
qdfirqavayqk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5kinD (D:)
snaqepnkdgfygkfggrfvpetlmtavlelekayresqadpsfqeelnqllrqyvgret
plyyaknltqhiggakiylkredlnhtgahkinnalgqvwlakrmgkkkiiaetgagqhg
vatataaalfnmectiymgeedvkrqalnvfrmellgakveavtdgsrvlkdavnaalrs
wvaniddthyilgsalgphpfpeivrdfqsvigreakqqyrdltgrdlpdalvacvgggs
naiglfhpfvedesvamygteaaglgvdtehhaatltkgrpgvlhgslmdvlqdahgqil
eafsisagldypgigpehshyhdikrasyvpvtdeealegfqllsrvegiipalesshai
afavklakelgpeksmivclsgrgdkdvvqvkdrleadaakkgeaha

    Sequence, based on observed residues (ATOM records): (download) 
    >5kinD (D:)
qepnkdgfygkfggrfvpetlmtavlelekayresqadpsfqeelnqllrqyvgretply
yaknltqhiggakiylkredlnhtgahkinnalgqvwlakrmgkkkiiaetgagqhgvat
ataaalfnmectiymgeedvkrqalnvfrmellgakveavtdgsrvlkdavnaalrswva
niddthyilgsalgphpfpeivrdfqsvigreakqqyrdltgrdlpdalvacvgggsnai
glfhpfvedesvamygteaaglgvdtehhaatltkgrpgvlhgslmdvlqdahgqileaf
sisagldypgigpehshyhdikrasyvpvtdeealegfqllsrvegiipalesshaiafa
vklakelgpeksmivclsgrgdkdvvqvkdrleadaakk