PDB entry 5dle

View 5dle on RCSB PDB site
Description: Crystal structure from a domain (Thr161-F265) from fructose-specific iiabc component (Pts system) from Borrelia burgdorferi
Class: transferase
Keywords: SSGCID, Borellia burgdorferi, Pts system, fructose-specific iiabc component, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, TRANSFERASE
Deposited on 2015-09-04, released 2015-11-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-11-04, with a file datestamp of 2015-10-30.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pts system, fructose-specific iiabc component
    Species: Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) [TaxId:224326]
    Gene: BB_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5dlea_
  • Chain 'B':
    Compound: Pts system, fructose-specific iiabc component
    Species: Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) [TaxId:224326]
    Gene: BB_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5dleb_
  • Chain 'C':
    Compound: Pts system, fructose-specific iiabc component
    Species: Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) [TaxId:224326]
    Gene: BB_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5dlec_
  • Chain 'D':
    Compound: Pts system, fructose-specific iiabc component
    Species: Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) [TaxId:224326]
    Gene: BB_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5dled_
  • Heterogens: IMD, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5dleA (A:)
mahhhhhhtkaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalt
eeeiknasvvilavdkdidekrfegkrvykvstvkainnteniikesfnapvf

    Sequence, based on observed residues (ATOM records): (download) 
    >5dleA (A:)
kaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalteeeiknasv
vilavdkdidekrfegkrvykvstvkainnteniikesfnapvf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dleB (B:)
mahhhhhhtkaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalt
eeeiknasvvilavdkdidekrfegkrvykvstvkainnteniikesfnapvf

    Sequence, based on observed residues (ATOM records): (download) 
    >5dleB (B:)
kaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalteeeiknasv
vilavdkdidekrfegkrvykvstvkainnteniikesfnapvf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5dleC (C:)
mahhhhhhtkaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalt
eeeiknasvvilavdkdidekrfegkrvykvstvkainnteniikesfnapvf

    Sequence, based on observed residues (ATOM records): (download) 
    >5dleC (C:)
kaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalteeeiknasv
vilavdkdidekrfegkrvykvstvkainnteniikesfnapvf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5dleD (D:)
mahhhhhhtkaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalt
eeeiknasvvilavdkdidekrfegkrvykvstvkainnteniikesfnapvf

    Sequence, based on observed residues (ATOM records): (download) 
    >5dleD (D:)
kaekivavtacpvgvahtyiaakkieneakkqgysirvetqgsigienalteeeiknasv
vilavdkdidekrfegkrvykvstvkainnteniikesfnapvf