PDB entry 4m4r

View 4m4r on RCSB PDB site
Description: Epha4 ectodomain complex with ephrin a5
Class: transferase
Keywords: eph receptor ephrin complex, TRANSFERASE
Deposited on 2013-08-07, released 2013-10-30
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-10-30, with a file datestamp of 2013-10-25.
Experiment type: XRAY
Resolution: 3.13 Å
R-factor: 0.247
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ephrin type-A receptor 4
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA4, HEK8, SEK, TYRO1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Ephrin-A5
    Species: Homo sapiens [TaxId:9606]
    Gene: EFNA5, EPLG7, LERK7
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52803 (2-140)
      • expression tag (0-1)
    Domains in SCOPe 2.04: d4m4rb_
  • Chain 'C':
    Compound: Ephrin type-A receptor 4
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA4, HEK8, SEK, TYRO1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Ephrin-A5
    Species: Homo sapiens [TaxId:9606]
    Gene: EFNA5, EPLG7, LERK7
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52803 (2-140)
      • expression tag (1)
    Domains in SCOPe 2.04: d4m4rd_
  • Chain 'E':
    Compound: Ephrin type-A receptor 4
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA4, HEK8, SEK, TYRO1
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Ephrin-A5
    Species: Homo sapiens [TaxId:9606]
    Gene: EFNA5, EPLG7, LERK7
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4m4rf_
  • Chain 'G':
    Compound: Ephrin type-A receptor 4
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA4, HEK8, SEK, TYRO1
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Ephrin-A5
    Species: Homo sapiens [TaxId:9606]
    Gene: EFNA5, EPLG7, LERK7
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4m4rh_
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4m4rB (B:)
aaavadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnf
dgysacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaip
dngrrsclklkvfvrptnscm

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4m4rD (D:)
aaavadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnf
dgysacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaip
dngrrsclklkvfvrptnscm

    Sequence, based on observed residues (ATOM records): (download) 
    >4m4rD (D:)
aavadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnfd
gysacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaipd
ngrrsclklkvfvrptnscm

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4m4rF (F:)
aaavadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnf
dgysacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaip
dngrrsclklkvfvrptnscm

    Sequence, based on observed residues (ATOM records): (download) 
    >4m4rF (F:)
vadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnfdgy
sacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaipdng
rrsclklkvfvrptnscm

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4m4rH (H:)
aaavadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnf
dgysacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaip
dngrrsclklkvfvrptnscm

    Sequence, based on observed residues (ATOM records): (download) 
    >4m4rH (H:)
vadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnfdgy
sacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaipdng
rrsclklkvfvrptnscm