Lineage for d4m4rd_ (4m4r D:)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1527467Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 1527468Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 1528797Family b.6.1.5: Ephrin ectodomain [74874] (3 protein domains)
    eukaryotic signaling domain probably related to cupredoxins but lacking the metal-binding site
    automatically mapped to Pfam PF00812
  6. 1528813Protein automated matches [190316] (1 species)
    not a true protein
  7. 1528814Species Human (Homo sapiens) [TaxId:9606] [187131] (6 PDB entries)
  8. 1528820Domain d4m4rd_: 4m4r D: [253743]
    automated match to d1shxa_
    complexed with nag

Details for d4m4rd_

PDB Entry: 4m4r (more details), 3.13 Å

PDB Description: Epha4 ectodomain complex with ephrin a5
PDB Compounds: (D:) Ephrin-A5

SCOPe Domain Sequences for d4m4rd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4m4rd_ b.6.1.5 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aavadryavywnssnprfqrgdyhidvcindyldvfcphyedsvpedkteryvlymvnfd
gysacdhtskgfkrwecnrphspngplkfsekfqlftpfslgfefrpgreyfyissaipd
ngrrsclklkvfvrptnscm

SCOPe Domain Coordinates for d4m4rd_:

Click to download the PDB-style file with coordinates for d4m4rd_.
(The format of our PDB-style files is described here.)

Timeline for d4m4rd_: