PDB entry 4gjh

View 4gjh on RCSB PDB site
Description: Crystal Structure of the TRAF domain of TRAF5
Class: immune system
Keywords: TRAF domain, IMMUNE SYSTEM
Deposited on 2012-08-09, released 2012-11-28
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-11-28, with a file datestamp of 2012-11-23.
Experiment type: XRAY
Resolution: 2.81 Å
R-factor: 0.227
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TNF receptor-associated factor 5
    Species: Mus musculus [TaxId:10090]
    Gene: Traf5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gjha_
  • Chain 'B':
    Compound: TNF receptor-associated factor 5
    Species: Mus musculus [TaxId:10090]
    Gene: Traf5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gjhb_
  • Chain 'C':
    Compound: TNF receptor-associated factor 5
    Species: Mus musculus [TaxId:10090]
    Gene: Traf5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gjhc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gjhA (A:)
nihkaqlnkneerfkqlegacysgkliwkvtdyrvkkreaveghtvsvfsqpfytsrcgy
rlcaraylngdgsgkgthlslyfvvmrgefdsllqwpfrqrvtlmlldqsgkknhivetf
kadpnsssfkrpdgemniasgcprfvshstlenskntyikddtlflkvavdltdledl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gjhA (A:)
hkaqlnkneerfkqlegacysgkliwkvtdyrvkkreaveghtvsvfsqpfytsrcgyrl
caraylngdgsgkgthlslyfvvmrgefdsllqwpfrqrvtlmlldqsgkknhivetfka
dpnsssfkrpdgemniasgcprfvshstlenskntyikddtlflkvavdltdled

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4gjhB (B:)
nihkaqlnkneerfkqlegacysgkliwkvtdyrvkkreaveghtvsvfsqpfytsrcgy
rlcaraylngdgsgkgthlslyfvvmrgefdsllqwpfrqrvtlmlldqsgkknhivetf
kadpnsssfkrpdgemniasgcprfvshstlenskntyikddtlflkvavdltdledl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gjhB (B:)
ihkaqlnkneerfkqlegacysgkliwkvtdyrvkkreaveghtvsvfsqpfytsrcgyr
lcaraylngdgsgkgthlslyfvvmrgefdsllqwpfrqrvtlmlldqsgkknhivetfk
adpnsssfkrpdgemniasgcprfvshstlenskntyikddtlflkvavdltdled

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4gjhC (C:)
nihkaqlnkneerfkqlegacysgkliwkvtdyrvkkreaveghtvsvfsqpfytsrcgy
rlcaraylngdgsgkgthlslyfvvmrgefdsllqwpfrqrvtlmlldqsgkknhivetf
kadpnsssfkrpdgemniasgcprfvshstlenskntyikddtlflkvavdltdledl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gjhC (C:)
nihkaqlnkneerfkqlegacysgkliwkvtdyrvkkreaveghtvsvfsqpfytsrcgy
rlcaraylngdgsgkgthlslyfvvmrgefdsllqwpfrqrvtlmlldqsgkknhivetf
kadpnsssfkrpdgemniasgcprfvshstlenskntyikddtlflkvavdltdled