PDB entry 3r9v
View 3r9v on RCSB PDB site
Description: Cocrystal Structure of Proteolytically Truncated Form of IpaD from Shigella flexneri Bound to Deoxycholate
Class: cell invasion
Keywords: type III secretion system, tip protein, deoxycholate, CELL INVASION
Deposited on
2011-03-26, released
2011-12-07
The last revision prior to the SCOPe 2.06 freeze date was dated
2012-04-04, with a file datestamp of
2012-03-30.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.229
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: invasin ipad
Species: Shigella flexneri [TaxId:623]
Gene: ipaD, CP0126
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3r9va_ - Chain 'B':
Compound: invasin ipad
Species: Shigella flexneri [TaxId:623]
Gene: ipaD, CP0126
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3r9vb_ - Heterogens: GOL, DXC, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3r9vA (A:)
gshpvssltmlndtlhnirttnqalkkelsqktltktsleeialhssqismdvnksaqll
dilsrneypinkdarellhsapkeaeldgdqmishrelwakiansindineqylkvyeha
vssytqmyqdfsavlsslagwispggndgnsvklqvnslkkaleelkekykdkplypann
tvsqeqankwltelggtigkvsqknggyvvsinmtpidnmlksldnlggngevvldnaky
qawnagfsaedetmknnlqtlvqkysnansifdnlvkvlsstisss
Sequence, based on observed residues (ATOM records): (download)
>3r9vA (A:)
eldgdqmishrelwakiansindineqylkvyehavssytqmyqdfsavlsslagwispg
gndgnsvklqvnslkkaleelkekykdkplypanntvsqeqankwltelggtigkvsqkn
ggyvvsinmtpidnmlksldnlggngevvldnakyqawnagfsaedetmknnlqtlvqky
snansifdnlvkvlssti
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3r9vB (B:)
gshpvssltmlndtlhnirttnqalkkelsqktltktsleeialhssqismdvnksaqll
dilsrneypinkdarellhsapkeaeldgdqmishrelwakiansindineqylkvyeha
vssytqmyqdfsavlsslagwispggndgnsvklqvnslkkaleelkekykdkplypann
tvsqeqankwltelggtigkvsqknggyvvsinmtpidnmlksldnlggngevvldnaky
qawnagfsaedetmknnlqtlvqkysnansifdnlvkvlsstisss
Sequence, based on observed residues (ATOM records): (download)
>3r9vB (B:)
gdqmishrelwakiansindineqylkvyehavssytqmyqdfsavlsslkkaleelkek
ykdkplypanntvsqeqankwltelggtigkvsqknggyvvsinmtpidnmlksldnlgg
ngevwnagfsaedetmknnlqtlvqkysnansifdnlvkvlss