PDB entry 3r13
View 3r13 on RCSB PDB site
Description: Crystal structure of a Deoxyribose-phosphate aldolase (TM_1559) from THERMOTOGA MARITIMA at 1.83 A resolution
Class: lyase
Keywords: TIM beta/alpha-barrel, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, LYASE
Deposited on
2011-03-09, released
2011-03-30
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-08, with a file datestamp of
2017-11-03.
Experiment type: XRAY
Resolution: 1.83 Å
R-factor: N/A
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: deoxyribose-phosphate aldolase
Species: Thermotoga maritima [TaxId:2336]
Gene: deoC, TM1559, TM_1559
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3r13a1, d3r13a2 - Chain 'B':
Compound: deoxyribose-phosphate aldolase
Species: Thermotoga maritima [TaxId:2336]
Gene: deoC, TM1559, TM_1559
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3r13b1, d3r13b2 - Heterogens: UNL, ACT, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3r13A (A:)
mgsdkihhhhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpdd
ikklclearenrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifa
vesgadeidmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacv
isklagahfvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygad
rigtssgvkivqggeerygg
Sequence, based on observed residues (ATOM records): (download)
>3r13A (A:)
sdkihhhhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpddik
klclearenrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifave
sgadeidmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacvis
klagahfvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygadri
gtssgvkivqggeeryg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3r13B (B:)
mgsdkihhhhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpdd
ikklclearenrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifa
vesgadeidmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacv
isklagahfvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygad
rigtssgvkivqggeerygg
Sequence, based on observed residues (ATOM records): (download)
>3r13B (B:)
sdkihhhhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpddik
klclearenrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifave
sgadeidmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacvis
klagahfvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygadri
gtssgvkivqggeerygg