PDB entry 3pot

View 3pot on RCSB PDB site
Description: Structural analysis of a Ni(III)-methyl species in methyl-coenzyme M reductase from Methanothermobacter marburgensis
Class: transferase
Keywords: metal-binding, nickel, methyl-coenzyme m reductase, methanogenesis, methylation, transferase
Deposited on 2010-11-23, released 2011-04-13
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-04-27, with a file datestamp of 2011-04-22.
Experiment type: XRAY
Resolution: 1.2 Å
R-factor: 0.133
AEROSPACI score: 0.85 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Methyl-coenzyme M reductase I subunit alpha
    Species: Methanothermobacter marburgensis [TaxId:145263]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Methyl-coenzyme M reductase I subunit beta
    Species: Methanothermobacter marburgensis [TaxId:145263]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Methyl-coenzyme M reductase I subunit gamma
    Species: Methanothermobacter marburgensis [TaxId:145263]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3potc_
  • Chain 'D':
    Compound: Methyl-coenzyme M reductase I subunit alpha
    Species: Methanothermobacter marburgensis [TaxId:145263]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Methyl-coenzyme M reductase I subunit beta
    Species: Methanothermobacter marburgensis [TaxId:145263]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Methyl-coenzyme M reductase I subunit gamma
    Species: Methanothermobacter marburgensis [TaxId:145263]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3potf_
  • Heterogens: MG, F43, COM, TXZ, TP7, 06C, K, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3potC (C:)
maqyypgttkvaqnrrnfcnpeyeleklreisdedvvkilghrapgeeypsvhppleemd
epedairemvepidgakagdrvryiqftdsmyfapaqpyvrsraylcryrgadagtlsgr
qiietrerdlekiskelleteffdparsgvrgksvhghslrldedgmmfdmlrrqiynkd
tgrvemvknqigdeldepvdlgepldeetlmekttiyrvdgeayrddveaveimqrihvl
rsqggfnle

    Sequence, based on observed residues (ATOM records): (download) 
    >3potC (C:)
aqyypgttkvaqnrrnfcnpeyeleklreisdedvvkilghrapgeeypsvhppleemde
pedairemvepidgakagdrvryiqftdsmyfapaqpyvrsraylcryrgadagtlsgrq
iietrerdlekiskelleteffdparsgvrgksvhghslrldedgmmfdmlrrqiynkdt
grvemvknqigdeldepvdlgepldeetlmekttiyrvdgeayrddveaveimqrihvlr
sqggfn

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3potF (F:)
maqyypgttkvaqnrrnfcnpeyeleklreisdedvvkilghrapgeeypsvhppleemd
epedairemvepidgakagdrvryiqftdsmyfapaqpyvrsraylcryrgadagtlsgr
qiietrerdlekiskelleteffdparsgvrgksvhghslrldedgmmfdmlrrqiynkd
tgrvemvknqigdeldepvdlgepldeetlmekttiyrvdgeayrddveaveimqrihvl
rsqggfnle

    Sequence, based on observed residues (ATOM records): (download) 
    >3potF (F:)
aqyypgttkvaqnrrnfcnpeyeleklreisdedvvkilghrapgeeypsvhppleemde
pedairemvepidgakagdrvryiqftdsmyfapaqpyvrsraylcryrgadagtlsgrq
iietrerdlekiskelleteffdparsgvrgksvhghslrldedgmmfdmlrrqiynkdt
grvemvknqigdeldepvdlgepldeetlmekttiyrvdgeayrddveaveimqrihvlr
sqggfn