PDB entry 3ot4

View 3ot4 on RCSB PDB site
Description: Structure and Catalytic Mechanism of Bordetella bronchiseptica nicF
Class: hydrolase
Keywords: Bordetella bronchiseptica, nicF, maleamate hydrolase, hydrolase
Deposited on 2010-09-10, released 2011-09-21
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-09-21, with a file datestamp of 2011-09-16.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.242
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3ot4c_
  • Chain 'D':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3ot4d_
  • Chain 'E':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3ot4f_
  • Chain 'G':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3ot4g_
  • Chain 'H':
    Compound: Putative isochorismatase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB0275, BB1782, nicF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3ot4h_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3ot4C (C:)
gsdkihhhhhhssgenlyfqghmgndlgsyerqgfgaalplkapygllivdfvngfadpa
qfgggniaaaiettrtvlaaarergwavahsrivyadddadgnifsikvpgmltlkehap
asaivpqlapqageyvvrkstpsafygtmlaawlaqrgvqtllvagattsgcvrasvvda
msagfrplvlsdcvgdralgpheanlfdmrqkyaavmthdealaktkglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ot4C (C:)
yerqgfgaalplkapygllivdfvngfadpaqfgggniaaaiettrtvlaaarergwava
hsrivyadddadgnifsikvpgmltlkehapasaivpqlapqageyvvrkstpsafygtm
laawlaqrgvqtllvagattsgcvrasvvdamsagfrplvlsdcvgdralgpheanlfdm
rqkyaavmthdealaktk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ot4D (D:)
gsdkihhhhhhssgenlyfqghmgndlgsyerqgfgaalplkapygllivdfvngfadpa
qfgggniaaaiettrtvlaaarergwavahsrivyadddadgnifsikvpgmltlkehap
asaivpqlapqageyvvrkstpsafygtmlaawlaqrgvqtllvagattsgcvrasvvda
msagfrplvlsdcvgdralgpheanlfdmrqkyaavmthdealaktkglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ot4D (D:)
yerqgfgaalplkapygllivdfvngfadpaqfgggniaaaiettrtvlaaarergwava
hsrivyadddadgnifsikvpgmltlkehapasaivpqlapqageyvvrkstpsafygtm
laawlaqrgvqtllvagattsgcvrasvvdamsagfrplvlsdcvgdralgpheanlfdm
rqkyaavmthdealaktk

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3ot4F (F:)
gsdkihhhhhhssgenlyfqghmgndlgsyerqgfgaalplkapygllivdfvngfadpa
qfgggniaaaiettrtvlaaarergwavahsrivyadddadgnifsikvpgmltlkehap
asaivpqlapqageyvvrkstpsafygtmlaawlaqrgvqtllvagattsgcvrasvvda
msagfrplvlsdcvgdralgpheanlfdmrqkyaavmthdealaktkglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ot4F (F:)
yerqgfgaalplkapygllivdfvngfadpaqfgggniaaaiettrtvlaaarergwava
hsrivyadddadgnifsikvpgmltlkehapasaivpqlapqageyvvrkstpsafygtm
laawlaqrgvqtllvagattsgcvrasvvdamsagfrplvlsdcvgdralgpheanlfdm
rqkyaavmthdealakt

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3ot4G (G:)
gsdkihhhhhhssgenlyfqghmgndlgsyerqgfgaalplkapygllivdfvngfadpa
qfgggniaaaiettrtvlaaarergwavahsrivyadddadgnifsikvpgmltlkehap
asaivpqlapqageyvvrkstpsafygtmlaawlaqrgvqtllvagattsgcvrasvvda
msagfrplvlsdcvgdralgpheanlfdmrqkyaavmthdealaktkglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ot4G (G:)
yerqgfgaalplkapygllivdfvngfadpaqfgggniaaaiettrtvlaaarergwava
hsrivyadddadgnifsikvpgmltlkehapasaivpqlapqageyvvrkstpsafygtm
laawlaqrgvqtllvagattsgcvrasvvdamsagfrplvlsdcvgdralgpheanlfdm
rqkyaavmthdealakt

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3ot4H (H:)
gsdkihhhhhhssgenlyfqghmgndlgsyerqgfgaalplkapygllivdfvngfadpa
qfgggniaaaiettrtvlaaarergwavahsrivyadddadgnifsikvpgmltlkehap
asaivpqlapqageyvvrkstpsafygtmlaawlaqrgvqtllvagattsgcvrasvvda
msagfrplvlsdcvgdralgpheanlfdmrqkyaavmthdealaktkglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ot4H (H:)
syerqgfgaalplkapygllivdfvngfadpaqfgggniaaaiettrtvlaaarergwav
ahsrivyadddadgnifsikvpgmltlkehapasaivpqlapqageyvvrkstpsafygt
mlaawlaqrgvqtllvagattsgcvrasvvdamsagfrplvlsdcvgdralgpheanlfd
mrqkyaavmthdealakt