PDB entry 3o8e

View 3o8e on RCSB PDB site
Description: Structure of extracelllar portion of CD46 in complex with Adenovirus type 11 knob
Class: cell adhesion/immune system
Keywords: short consensus repeat, complement control protein, fiber knob, virus-receptor interaction, cell adhesion-immunity complex, adenovirus, CD46, CELL ADHESION - IMMUNE SYSTEM complex, CELL ADHESION-IMMUNE SYSTEM complex
Deposited on 2010-08-03, released 2010-10-13
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 2.84 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fiber 36.1 kDa protein
    Species: Human adenovirus 11 [TaxId:10541]
    Gene: CD46, MCP, MIC10
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3o8ea_
  • Chain 'B':
    Compound: Membrane cofactor protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Fiber 36.1 kDa protein
    Species: Human adenovirus 11 [TaxId:10541]
    Gene: CD46, MCP, MIC10
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3o8ec_
  • Chain 'D':
    Compound: Membrane cofactor protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: DTD, NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3o8eA (A:)
gshmgltfnsnniciddnintlwtgvnpteancqimnssesndckliltlvktgalvtaf
vyvigvsnnfnmltthrninftaelffdstgnlltrlsslktplnhksgqnmatgaitna
kgfmpsttaypfndnsrekenyiygtcyytasdrtafpidisvmlnrraindetsyciri
twswntgdapevqtsattlvtspftfyyiredd

    Sequence, based on observed residues (ATOM records): (download) 
    >3o8eA (A:)
dnintlwtgvnpteancqimnssesndckliltlvktgalvtafvyvigvsnnfnmltth
rninftaelffdstgnlltrlsslktplnhksgqnmatgaitnakgfmpsttaypfndns
rekenyiygtcyytasdrtafpidisvmlnrraindetsyciritwswntgdapevqtsa
ttlvtspftfyyiredd

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3o8eC (C:)
gshmgltfnsnniciddnintlwtgvnpteancqimnssesndckliltlvktgalvtaf
vyvigvsnnfnmltthrninftaelffdstgnlltrlsslktplnhksgqnmatgaitna
kgfmpsttaypfndnsrekenyiygtcyytasdrtafpidisvmlnrraindetsyciri
twswntgdapevqtsattlvtspftfyyiredd

    Sequence, based on observed residues (ATOM records): (download) 
    >3o8eC (C:)
dnintlwtgvnpteancqimnssesndckliltlvktgalvtafvyvigvsnnfnmltth
rninftaelffdstgnlltrlsslktplnhksgqnmatgaitnakgfmpsttaypfndns
rekenyiygtcyytasdrtafpidisvmlnrraindetsyciritwswntgdapevqtsa
ttlvtspftfyyiredd

  • Chain 'D':
    No sequence available.