PDB entry 3l12

View 3l12 on RCSB PDB site
Description: Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (YP_165505.1) from Silicibacter pomeroyi DSS-3 at 1.60 A resolution
Class: hydrolase
Keywords: Putative glycerophosphoryl diester phosphodiesterase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE
Deposited on 2009-12-10, released 2009-12-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative glycerophosphoryl diester phosphodiesterase
    Species: Silicibacter pomeroyi [TaxId:89184]
    Gene: SPO0236
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3l12a_
  • Chain 'B':
    Compound: putative glycerophosphoryl diester phosphodiesterase
    Species: Silicibacter pomeroyi [TaxId:89184]
    Gene: SPO0236
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3l12b_
  • Heterogens: MG, CL, UNL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3l12A (A:)
gmngfsqleglrghpsvvrvighrgargvmpentlegfaftlaagvralefdvvmtadgv
pvvthnhhlanamtrdgqghwltgaerqvaemtyaeiraldvggldgrtvygrrfpdqaf
ltgihvprlgelldlcagygdqapylllelksdpalmhdhaaraemvaavladvrryrme
prtvmhsfdwallgecrrqapdlptsylsqlpenaddpgedsakpvgpdydrmteslpqa
vasaggqlwcpyfldvtpelvaeahdlglivltwtvnepedirrmattgvdgivtdypgr
tqrilidmglswt

    Sequence, based on observed residues (ATOM records): (download) 
    >3l12A (A:)
gfsqleglrghpsvvrvighrgargvmpentlegfaftlaagvralefdvvmtadgvpvv
thnhhlanamtrdgqghwltgaerqvaemtyaeiraldvggldgrtvygrrfpdqafltg
ihvprlgelldlcagygdqapylllelksdpalmhdhaaraemvaavladvrryrmeprt
vmhsfdwallgecrrqapdlptsylsqlpegpdydrmteslpqavasaggqlwcpyfldv
tpelvaeahdlglivltwtvnepedirrmattgvdgivtdypgrtqrilidmglswt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3l12B (B:)
gmngfsqleglrghpsvvrvighrgargvmpentlegfaftlaagvralefdvvmtadgv
pvvthnhhlanamtrdgqghwltgaerqvaemtyaeiraldvggldgrtvygrrfpdqaf
ltgihvprlgelldlcagygdqapylllelksdpalmhdhaaraemvaavladvrryrme
prtvmhsfdwallgecrrqapdlptsylsqlpenaddpgedsakpvgpdydrmteslpqa
vasaggqlwcpyfldvtpelvaeahdlglivltwtvnepedirrmattgvdgivtdypgr
tqrilidmglswt

    Sequence, based on observed residues (ATOM records): (download) 
    >3l12B (B:)
gfsqleglrghpsvvrvighrgargvmpentlegfaftlaagvralefdvvmtadgvpvv
thnhhlanamtrdgqghwltgaerqvaemtyaeiraldvggldgrtvygrrfpdqafltg
ihvprlgelldlcagygdqapylllelksdpahdhaaraemvaavladvrryrmeprtvm
hsfdwallgecrrqapdlptsylsqlpegpdydrmteslpqavasaggqlwcpyfldvtp
elvaeahdlglivltwtvnepedirrmattgvdgivtdypgrtqrilidmglswt